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Publications

2021

An Intelligent Monitoring System for Assessing Bee Hive Health

Authors
Braga, D; Madureira, A; Scotti, F; Piuri, V; Abraham, A;

Publication
IEEE ACCESS

Abstract
Up to one third of the global food production depends on the pollination of honey bees, making them vital. This study defines a methodology to create a bee hive health monitoring system through image processing techniques. The approach consists of two models, where one performs the detection of bees in an image and the other classifies the detected bee's health. The main contribution of the defined methodology is the increased efficacy of the models, whilst maintaining the same efficiency found in the state of the art. Two databases were used to create models based on Convolutional Neural Network (CNN). The best results consist of 95% accuracy for health classification of a bee and 82% accuracy in detecting the presence of bees in an image, higher than those found in the state-of-the-art.

2021

Security Characterization of J-PAKE and its Variants

Authors
Abdalla, M; Barbosa, M; Rønne, PB; Ryan, PYA; Sala, P;

Publication
IACR Cryptol. ePrint Arch.

Abstract

2021

Shedding Light on the African Enigma: In Vitro Testing of Homo sapiens-Helicobacter pylori Coevolution

Authors
Cavadas, B; Leite, M; Pedro, N; Magalhaes, AC; Melo, J; Correia, M; Maximo, V; Camacho, R; Fonseca, NA; Figueiredo, C; Pereira, L;

Publication
MICROORGANISMS

Abstract
The continuous characterization of genome-wide diversity in population and case-cohort samples, allied to the development of new algorithms, are shedding light on host ancestry impact and selection events on various infectious diseases. Especially interesting are the long-standing associations between humans and certain bacteria, such as the case of Helicobacter pylori, which could have been strong drivers of adaptation leading to coevolution. Some evidence on admixed gastric cancer cohorts have been suggested as supporting Homo-Helicobacter coevolution, but reliable experimental data that control both the bacterium and the host ancestries are lacking. Here, we conducted the first in vitro coinfection assays with dual human- and bacterium-matched and -mismatched ancestries, in African and European backgrounds, to evaluate the genome wide gene expression host response to H. pylori. Our results showed that: (1) the host response to H. pylori infection was greatly shaped by the human ancestry, with variability on innate immune system and metabolism; (2) African human ancestry showed signs of coevolution with H. pylori while European ancestry appeared to be maladapted; and (3) mismatched ancestry did not seem to be an important differentiator of gene expression at the initial stages of infection as assayed here.

2021

The Role of Liquid Biopsy in Early Diagnosis of Lung Cancer

Authors
Freitas, C; Sousa, C; Machado, F; Serino, M; Santos, V; Cruz Martins, N; Teixeira, A; Cunha, A; Pereira, T; Oliveira, HP; Costa, JL; Hespanhol, V;

Publication
FRONTIERS IN ONCOLOGY

Abstract
Liquid biopsy is an emerging technology with a potential role in the screening and early detection of lung cancer. Several liquid biopsy-derived biomarkers have been identified and are currently under ongoing investigation. In this article, we review the available data on the use of circulating biomarkers for the early detection of lung cancer, focusing on the circulating tumor cells, circulating cell-free DNA, circulating micro-RNAs, tumor-derived exosomes, and tumor-educated platelets, providing an overview of future potential applicability in the clinical practice. While several biomarkers have shown exciting results, diagnostic performance and clinical applicability is still limited. The combination of different biomarkers, as well as their combination with other diagnostic tools show great promise, although further research is still required to define and validate the role of liquid biopsies in clinical practice.

2021

What role do patients prefer in medical decision-making?: a population-based nationwide cross-sectional study

Authors
Gregorio, M; Teixeira, A; Henriques, T; Pascoa, R; Baptista, S; Carvalho, R; Martins, C;

Publication
BMJ OPEN

Abstract
Objective To assess patients' preferred roles in healthcare-related decision-making in a representative sample of the Portuguese population. Design Population-based nationwide cross-sectional study. Setting and participants A sample of Portuguese people 20 years or older were interviewed face-to-face using a questionnaire with the Problem-Solving Decision-Making scale. Outcomes The primary outcome was patients' preferred role for each vignette of the problem-solving decision-making scale. Sociodemographic factors associated with the preferred roles were the secondary outcomes. Results 599 participants (20-99 years, 53.8% women) were interviewed. Three vignettes of the Problem-Solving Decision-Making scale were compared: morbidity, mortality and quality of life. Most patients preferred a passive role for both the problem-solving and decision-making components of the scale, particularly for the mortality vignette (66.1% in the analysis of the three vignettes), although comparatively more opted to share decision in the decision-making component. For the quality of life vignette, a higher percentage of patients wanted a shared role (44.3%) than with the other two vignettes. In the problem-solving component, preferences were significantly associated with area of residence (p<0.001) and educational level (p=0.013), while in the decision-making, component preferences were associated with age (p=0.020), educational level (p=0.015) and profession (p<0.001). Conclusions In this representative sample of the Portuguese mainland population, most patients preferred a practitioner-controlling role for both the problem-solving and decision-making components. In a life-threatening situation, patients were more willing to let the doctor decide. In contrast, in a less serious situation, there is a greater willingness to participate in decision-making. We have found that shared decision-making is more acceptable to better-educated patients in the problem-solving component and to people who are younger, higher educated and employed, in the decision-making component.

2021

A Framework for Time-Cost-Quality Optimization in Project Management Problems Using an Exploratory Grid Concept in the Multi-Objective Simulated-Annealing

Authors
Mota, A; Avila, P; Albuquerque, R; Costa, L; Bastos, J;

Publication
INTERNATIONAL JOURNAL OF INFORMATION TECHNOLOGY & DECISION MAKING

Abstract
Time, cost, and quality are the three indispensable factors for the realization and success of a project. In this context, we propose a framework composed of a multi-objective approach and multi-criteria decision-making methods (MCDM) to solve time-cost-quality trade-off optimization problems. A multi-objective Simulated Annealing (MOSA) algorithm is used to compute an approximation to the Pareto optimal set. The concept of the exploratory grid is introduced in the MOSA to improve its performance. MCDM are used to assist the decision-making process. The Shannon entropy and AHP methods assign weights to criteria. The first methodology is for the inexperienced decision-makers, and the second concedes a personal and flexible weighting of the criteria weights, based on the project manager's assessment. The TOPSIS and VIKOR methods are considered to rank the solutions. Although they have the same purpose, the rankings achieved are different. A tool is implemented to solve a time-cost-quality trade-off problem on a project activities network. The computational experiments are analyzed and the results with the exploratory grid in Simulated Annealing (SA) are promising. Despite the framework aims to solve multi-objective trade-off optimization problems, supporting the decisions of the project manager, the methodologies used can also be applied in other areas.

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