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Publications

Publications by Renan Tosin

2023

Exploring the Impact of Water Stress on Grapevine Gene Expression and Polyphenol Production: Insights for Developing a Systems Biology Model †

Authors
Portis, I; Tosin, R; Oliveira Pinto, R; Pereira Dias, L; Santos, C; Martins, R; Cunha, M;

Publication
Engineering Proceedings

Abstract
This scientific paper delves into the effects of water stress on grapevines, specifically focusing on gene expression and polyphenol production. We conducted a controlled greenhouse experiment with three hydric conditions and analyzed the expression of genes related to polyphenol biosynthesis. Our results revealed significant differences in the expression of ABCC1, a gene linked to anthocyanin metabolism, under different irrigation treatments. These findings highlight the importance of anthocyanins in grapevine responses to abiotic stresses. By integrating genomics, metabolomics, and systems biology, this study contributes to our understanding of grapevine physiology under water stress conditions and offers insights into developing sensor technologies for real-world applications in viticulture. © 2023 by the authors.

2023

Enhancing Kiwi Bacterial Canker Leaf Assessment: Integrating Hyperspectral-Based Vegetation Indexes in Predictive Modeling †

Authors
Reis Pereira, M; Tosin, R; Martins, C; Dos Santos, FN; Tavares, F; Cunha, M;

Publication
Engineering Proceedings

Abstract
The potential of hyperspectral UV–VIS–NIR reflectance for the in-field, non-destructive discrimination of bacterial canker on kiwi leaves caused by Pseudomonas syringae pv. actinidiae (Psa) was analyzed. Spectral data (325–1075 nm) of twenty kiwi plants were obtained in vivo and in situ with a handheld spectroradiometer in two commercial kiwi orchards in northern Portugal over 15 weeks, resulting in 504 spectral measurements. The suitability of different vegetation indexes (VIs) and applied predictive models (based on supervised machine learning algorithms) for classifying non-symptomatic and symptomatic kiwi leaves was evaluated. Eight distinct types of VIs were identified as relevant for disease diagnosis, highlighting the relevance of the Green, Red, Red-Edge, and NIR spectral features. The class prediction was achieved with good model metrics, achieving an accuracy of 0.71, kappa of 0.42, sensitivity of 0.67, specificity of 0.75, and F1 of 0.67. Thus, the present findings demonstrated the potential of hyperspectral UV–VIS–NIR reflectance for the non-destructive discrimination of bacterial canker on kiwi leaves. © 2023 by the authors.

2023

LIBS-Based Analysis of Elemental Composition in Skin, Pulp, and Seeds of White and Red Grape Cultivars

Authors
Tosin, R; Monteiro Silva, F; Martins, R; Cunha, M;

Publication
CSAC 2023

Abstract

2023

Precision maturation assessment of grape tissues: Hyperspectral bi-directional reconstruction using tomography-like based on multi-block hierarchical principal component analysis

Authors
Tosin, R; Monteiro-Silva, F; Martins, R; Cunha, M;

Publication
BIOSYSTEMS ENGINEERING

Abstract
This paper introduces a tomography-like method for assessing grape maturation. It analyses inner tissue spectra through point-of-measurement (POM) sensing. A multi-block hierarchical principal component analysis (MHPCA) algorithm was used for the spectral reconstruction of total grapes (skin, pulp, and seed). Two grape cultivars, Loureiro (white; n = 216) and Vinhao (red; n = 205) were measured at 12 dates after veraison (DAV). The reconstructed spectra showed no significant differences (p < 0.001) from the originals for both grapes. Loureiro had better statistical metrics (Person's correlation coefficient (r) values for: total grape: 0.99, skin: 1; pulp: 1, seed: 0.94) than Vinhao (r values for: total grape: 0.92, skin: 0.92; pulp: 0.95, seed: 0.95). Using self learning artificial intelligence (SL-AI), the following parameters were predicted for both grapes: soluble solids content (%; MAPE <13%), puncture force (N; MAPE <29%), chlorophyll content (a.u.; MAPE <29%), and anthocyanin content (a.u.; MAPE <17%, Vinhao only). When comparing observed values with predicted skin, pulp, and seed spectra, Vinhao showed no statistical differences for most parameters, except pulp chlorophyll on one DAV in the final maturation stage. The same was done with the Loureiro cultivar. Although Loureiro mostly showed no statistical differences in assessed parameters across tissues and dates, variations were found in pulp and skin chlorophyll content and puncture force. This tomography-like approach based on tissue maturation can help viticulturists to access instant data on grape maturation, supporting informed decision-making and promoting more sustainable agricultural practices.

2023

Tomography-like for hyperspectral bi-directional grape tissue reconstruction based on machine learning: Implications for diagnosis composition and precision maturation monitoring

Authors
Tosin, R; Martins, R; Cunha, M;

Publication
BIO Web of Conferences

Abstract
This study used a tomography-like analysis to reconstruct the hyperspectral data from different tissues of the grapes: skin, pulp, and seeds. The dataset included 216 grapes of Loureiro (VIVC 25085) and 205 Vinhão (VIVC 13100) at various dates from the veraison until the harvest. A more comprehensive spectral data analysis identified how the internal tissues are related to the total grape spectra. Each tissue was reconstructed separately by decomposing the whole grapevine hyperspectral information. The results showed that the spectral reconstruction was more successful for Loureiro than Vinhão, with a mean absolute error of 6.08% and 33.32%, respectively. Partial least squares (PLS) regression models were developed for both cultivars using the reconstructed spectral data, enabling the modelling of ºBrix, puncture force (N), chlorophyll (a.u.), and anthocyanin content (a.u.). These models exhibited strong performance, with R2 > 0.8 and mean absolute percentage errors (MAPE) below 37%. This study emphasises the critical role of considering the grape's internal tissue in assessing its maturation process. The findings introduce an innovative methodology for efficiently evaluating grape maturation dynamics and inner tissue characteristics. By highlighting the importance of internal tissue analysis, this research paves the way for expedited and accurate monitoring of grape maturation, offering valuable insights into physiological-based viticultural practices and grape quality assessment. © The Authors, published by EDP Sciences. This is an open access article distributed under the terms of the Creative Commons Attribution License 4.0 (https://creativecommons.org/licenses/by/4.0/).

2023

Enhancing Grape Brix Prediction in Precision Viticulture: A Benchmarking Study of Predictive Models using Hyperspectral Proximal Sensors

Authors
Santos-Campos, M; Tosin, R; Rodrigues, L; Gonçalves, I; Barbosa, C; Martins, R; Santos, F; Cunha, M;

Publication
The 3rd International Electronic Conference on Agronomy

Abstract

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