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Publications

Publications by HumanISE

2024

Lightweight 3D CNN for the Segmentation of Coronary Calcifications and Calcium Scoring

Authors
Santos, R; Baeza, R; Filipe, VM; Renna, F; Paredes, H; Pedrosa, J;

Publication
2024 IEEE 22ND MEDITERRANEAN ELECTROTECHNICAL CONFERENCE, MELECON 2024

Abstract
Coronary artery calcium is a good indicator of coronary artery disease and can be used for cardiovascular risk stratification. Over the years, different deep learning approaches have been proposed to automatically segment coronary calcifications in computed tomography scans and measure their extent through calcium scores. However, most methodologies have focused on using 2D architectures which neglect most of the information present in those scans. In this work, we use a 3D convolutional neural network capable of leveraging the 3D nature of computed tomography scans and including more context in the segmentation process. In addition, the selected network is lightweight, which means that we can have 3D convolutions while having low memory requirements. Our results show that the predictions of the model, trained on the COCA dataset, are close to the ground truth for the majority of the patients in the test set obtaining a Dice score of 0.90 +/- 0.16 and a Cohen's linearly weighted kappa of 0.88 in Agatston score risk categorization. In conclusion, our approach shows promise in the tasks of segmenting coronary artery calcifications and predicting calcium scores with the objectives of optimizing clinical workflow and performing cardiovascular risk stratification.

2024

Image Captioning for Coronary Artery Disease Diagnosis

Authors
Magalhães, B; Pedrosa, J; Renna, F; Paredes, H; Filipe, V;

Publication
IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2024, Lisbon, Portugal, December 3-6, 2024

Abstract
Coronary artery disease (CAD) remains a leading cause of morbidity and mortality worldwide, underscoring the need for accurate and reliable diagnostic tools. While AI-driven models have shown significant promise in identifying CAD through imaging techniques, their 'black box' nature often hinders clinical adoption due to a lack of interpretability. In response, this paper proposes a novel approach to image captioning specifically tailored for CAD diagnosis, aimed at enhancing the transparency and usability of AI systems. Utilizing the COCA dataset, which comprises gated coronary CT images along with Ground Truth (GT) segmentation annotations, we introduce a hybrid model architecture that combines a Vision Transformer (ViT) for feature extraction with a Generative Pretrained Transformer (GPT) for generating clinically relevant textual descriptions. This work builds on a previously developed 3D Convolutional Neural Network (CNN) for coronary artery segmentation, leveraging its accurate delineations of calcified regions as critical inputs to the captioning process. By incorporating these segmentation outputs, our approach not only focuses on accurately identifying and describing calcified regions within the coronary arteries but also ensures that the generated captions are clinically meaningful and reflective of key diagnostic features such as location, severity, and artery involvement. This methodology provides medical practitioners with clear, context-rich explanations of AI-generated findings, thereby bridging the gap between advanced AI technologies and practical clinical applications. Furthermore, our work underscores the critical role of Explainable AI (XAI) in fostering trust, improving decision-making, and enhancing the efficacy of AI-driven diagnostics, paving the way for future advancements in the field. © 2024 IEEE.

2024

3D Modelling to Address Pandemic Challenges: A Project-Based Learning Methodology

Authors
Rocha, T; Ribeiro, A; Oliveira, J; Nunes, RR; Carvalho, D; Paredes, H; Martins, P;

Publication
CoRR

Abstract

2024

Do we know how to develop XR applications for ASD users?

Authors
Bages, MS; Ribera, M; Paredes, H;

Publication
Proceedings of the 11th International Conference on Software Development and Technologies for Enhancing Accessibility and Fighting Info-exclusion, DSAI 2024, Abu Dhabi, United Arab Emirates, November 13-15, 2024

Abstract

2024

Human-Computer Interaction: empowering adults with Autism and ADHD in higher education and employability

Authors
de Raposo, JF; Paulino, D; Paredes, H;

Publication
Proceedings of the 11th International Conference on Software Development and Technologies for Enhancing Accessibility and Fighting Info-exclusion, DSAI 2024, Abu Dhabi, United Arab Emirates, November 13-15, 2024

Abstract

2024

Leveraging WebTraceSense for User Interaction Log Analysis: A Case Study on a Visual Data Analysis Tool for the Visualization of User Interactions Logs

Authors
Paulino, D; Netto, ATC; Pinto, B; Sousa, F; Silva, G; Marinho, J; Apolinário, M; Magalhães, R; Kumar, A; Pereira, L; Rocha, A; Paredes, H;

Publication
Proceedings of the 11th International Conference on Software Development and Technologies for Enhancing Accessibility and Fighting Info-exclusion, DSAI 2024, Abu Dhabi, United Arab Emirates, November 13-15, 2024

Abstract

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