Abstract
Understanding protein folding and unfolding mechanisms are a central problem in molecular biology. Data obtained from molecular dynamics unfolding simulations may provide valuable insights for a better understanding of these mechanisms. Here, we propose the application of an augmented version of hierarchical clustering analysis to detect clusters of amino-acid residues with similar behavior in protein unfolding simulations. These clusters hold similar global pattern behavior of solvent accessible surface area (SASA) variation in unfolding simulations of the protein Transthyretin (TTR). Classical hierarchical clustering was applied to build a dendrogram based on the SASA variation of each amino-acid residue. The dendrogram was enriched with background information on the amino-acid residues, enabling the extraction of sub-clusters with well differentiated characteristics.

Abstract

Abstract
In this paper we discuss some issues which arise when applying classical data analysis techniques to interval data, focusing on the notions of dispersion, association and linear combinations of interval variables. We present some methods that have been proposed for analysing this kind of data, namely for clustering, discriminant analysis, linear regression and interval time series analysis.

Abstract

Abstract
A consequence of ILP systems being implemented in Prolog or using Prolog libraries is that, usually, these systems use a Prolog internal database to store and manipulate data. However, in real-world problems, the original data is rarely in Prolog format. In fact, the data is often kept in Relational Database Management Systems (RDBMS) and then converted to a format acceptable by the ILP system. Therefore, a more interesting approach is to link the ILP system to the RDBMS and manipulate the data without converting it. This scheme has the advantage of being more scalable since the whole data does not need to be loaded into memory by the ILP system. In this paper we study several approaches of coupling ILP systems with RDBMS systems and evaluate their impact on performance. We propose to use a Deductive Database (DDB) system to transparently translate the hypotheses to relational algebra expressions. The empirical evaluation performed shows that the execution time of ILP algorithms can be effectively reduced using a DDB and that the size of the problems can be increased due to a non-memory storage of the data.

Abstract
MicroGrids comprise low voltage distribution systems with distributed energy sources, storage devices and controllable loads, operated interconnected with the main power grid or autonomously, in a controlled coordinated way. Storage devices are absolutely essential for MicroGrid autonomous operation. However, depending on the operating conditions, their limited storage capacity is a major drawback and might compromise successful MicroGrid islanded operation. In this paper is proposed an index to evaluate MicroGrids security regarding an unplanned transition to islanded operation due to disturbances in the upstream Medium Voltage network. An Artificial Neural Network tool is proposed to forecast the security index for a credible range of operating scenarios. The usage of Artificial Neural Networks is emphasized due to its computational speed for on-line performance and its flexibility for providing corrective actions for insecure operating conditions in order to achieve a seamless transition from interconnected to islanded operation. © 2007 IEEE.