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Publicações

2021

Ovarian Structures Detection using Convolutional Neural Networks

Autores
Wanderley, DS; Ferreira, C; Campilho, A; Silva, JA;

Publicação
CENTERIS/ProjMAN/HCist

Abstract
The detection of ovarian structures from ultrasound images is an important task in gynecological and reproductive medicine. An automatic detection system of ovarian structures can work as a second opinion for less experienced physicians or complex ultrasound interpretations. This work presents a study of three popular CNN-based object detectors applied to the detection of healthy ovarian structures, namely ovary and follicles, in B-mode ultrasound images. The Faster R-CNN presented the best results, with a precision of 95.5% and a recall of 94.7% for both classes, being able to detect all the ovaries correctly. The RetinaNet showed competitive results, exceeding 90% of precision and recall. Despite being very fast and suitable for real-time applications, YOLOv3 was ineffective in detecting ovaries and had the worst results detecting follicles. We also compare CNN results with classical computer vision methods presented in the ovarian follicle detection literature.

2021

Patterns and Energy Consumption: Design, Implementation, Studies, and Stories

Autores
Feitosa, D; Cruz, L; Abreu, R; Fernandes, JP; Couto, M; Saraiva, J;

Publicação
Software Sustainability

Abstract
Software patterns are well known to both researchers and practitioners. They emerge from the need to tackle problems that become ever more common in development activities. Thus, it is not surprising that patterns have also been explored as a means to address issues related to energy consumption. In this chapter, we discuss patterns at code and design level and address energy efficiency not only as the main concern of patterns but also as a side effect of patterns that were not originally intended to deal with this problem. We first elaborate on state-of-the-art energy-oriented and general-purpose patterns. Next, we present cases of how patterns appear naturally as part of decisions made in industrial projects. By looking at the two levels of abstraction, we identify recurrent issues and solutions. In addition, we illustrate how patterns take part in a network of interconnected components and address energetic concerns. The reporting and cases discussed in this chapter emphasize the importance of being aware of energy-efficient strategies to make informed decisions, especially when developing sustainable software systems.

2021

Correction: Solving unsolved rare neurological diseases—a Solve-RD viewpoint (European Journal of Human Genetics, (2021), 10.1038/s41431-021-00901-1)

Autores
Schüle, R; Timmann, D; Erasmus, CE; Reichbauer, J; Wayand, M; Baets, J; Balicza, P; Chinnery, P; Dürr, A; Haack, T; Hengel, H; Horvath, R; Houlden, H; Kamsteeg, EJ; Kamsteeg, C; Lohmann, K; Macaya, A; Marcé Grau, A; Maver, A; Molnar, J; Münchau, A; Peterlin, B; Riess, O; Schöls, L; Schüle, R; Stevanin, G; Synofzik, M; Timmerman, V; van de Warrenburg, B; van Os, N; Vandrovcova, J; Wayand, M; Wilke, C; van de Warrenburg, B; Schöls, L; Wilke, C; Bevot, A; Zuchner, S; Beltran, S; Laurie, S; Matalonga, L; Graessner, H; Synofzik, M; Graessner, H; Zurek, B; Ellwanger, K; Ossowski, S; Demidov, G; Sturm, M; Schulze Hentrich, JM; Heutink, P; Brunner, H; Scheffer, H; Hoogerbrugge, N; Hoischen, A; ’t Hoen, PAC; Vissers, LELM; Gilissen, C; Steyaert, W; Sablauskas, K; de Voer, RM; Janssen, E; de Boer, E; Steehouwer, M; Yaldiz, B; Kleefstra, T; Brookes, AJ; Veal, C; Gibson, S; Wadsley, M; Mehtarizadeh, M; Riaz, U; Warren, G; Dizjikan, FY; Shorter, T; Töpf, A; Straub, V; Bettolo, CM; Specht, S; Clayton Smith, J; Banka, S; Alexander, E; Jackson, A; Faivre, L; Thauvin, C; Vitobello, A; Denommé Pichon, AS; Duffourd, Y; Tisserant, E; Bruel, AL; Peyron, C; Pélissier, A; Beltran, S; Gut, IG; Laurie, S; Piscia, D; Matalonga, L; Papakonstantinou, A; Bullich, G; Corvo, A; Garcia, C; Fernandez Callejo, M; Hernández, C; Picó, D; Paramonov, I; Lochmüller, H; Gumus, G; Bros Facer, V; Rath, A; Hanauer, M; Olry, A; Lagorce, D; Havrylenko, S; Izem, K; Rigour, F; Durr, A; Davoine, CS; Guillot Noel, L; Heinzmann, A; Coarelli, G; Bonne, G; Evangelista, T; Allamand, V; Nelson, I; Yaou, RB; Metay, C; Eymard, B; Cohen, E; Atalaia, A; Stojkovic, T; Macek, M; Turnovec, M; Thomasová, D; Kremliková, RP; Franková, V; Havlovicová, M; Kremlik, V; Parkinson, H; Keane, T; Spalding, D; Senf, A; Robinson, P; Danis, D; Robert, G; Costa, A; Patch, C; Hanna, M; Houlden, H; Reilly, M; Vandrovcova, J; Muntoni, F; Zaharieva, I; Sarkozy, A; de Jonghe, P; Nigro, V; Banfi, S; Torella, A; Musacchia, F; Piluso, G; Ferlini, A; Selvatici, R; Rossi, R; Neri, M; Aretz, S; Spier, I; Sommer, AK; Peters, S; Oliveira, C; Pelaez, JG; Matos, AR; José, CS; Ferreira, M; Gullo, I; Fernandes, S; Garrido, L; Ferreira, P; Carneiro, F; Swertz, MA; Johansson, L; van der Velde, JK; van der Vries, G; Neerincx, PB; Roelofs Prins, D; Köhler, S; Metcalfe, A; Verloes, A; Drunat, S; Rooryck, C; Trimouille, A; Castello, R; Morleo, M; Pinelli, M; Varavallo, A; De la Paz, MP; Sánchez, EB; Martín, EL; Delgado, BM; de la Rosa, FJAG; Ciolfi, A; Dallapiccola, B; Pizzi, S; Radio, FC; Tartaglia, M; Renieri, A; Benetti, E; Balicza, P; Molnar, MJ; Maver, A; Peterlin, B; Münchau, A; Lohmann, K; Herzog, R; Pauly, M; Macaya, A; Marcé Grau, A; Osorio, AN; de Benito, DN; Lochmüller, H; Thompson, R; Polavarapu, K; Beeson, D; Cossins, J; Cruz, PMR; Hackman, P; Johari, M; Savarese, M; Udd, B; Horvath, R; Capella, G; Valle, L; Holinski Feder, E; Laner, A; Steinke Lange, V; Schröck, E; Rump, A;

Publicação
European Journal of Human Genetics

Abstract
In the original publication of the article, consortium author lists were missing in the article. © 2021, The Author(s).

2021

Constraining particle acceleration in Sgr A(*) with simultaneous GRAVITY, Spitzer, NuSTAR, and Chandra observations

Autores
Abuter, R; Amorim, A; Baubock, M; Baganoff, F; Berger, JP; Boyce, H; Bonnet, H; Brandner, W; Clenet, Y; Davies, R; de Zeeuw, PT; Dexter, J; Dallilar, Y; Drescher, A; Eckart, A; Eisenhauer, F; Fazio, GG; Schreiber, NMF; Foster, K; Gammie, C; Garcia, P; Gao, F; Gendron, E; Genzel, R; Ghisellini, G; Gillessen, S; Gurwell, MA; Habibi, M; Haggard, D; Hailey, C; Harrison, FA; Haubois, X; Heissel, G; Henning, T; Hippler, S; Hora, JL; Horrobin, M; Jimenez Rosales, A; Jochum, L; Jocou, L; Kaufer, A; Kervella, P; Lacour, S; Lapeyrere, V; Le Bouquin, JB; Lena, P; Lowrance, PJ; Lutz, D; Markoff, S; Mori, K; Morris, MR; Neilsen, J; Nowak, M; Ott, T; Paumard, T; Perraut, K; Perrin, G; Ponti, G; Pfuhl, O; Rabien, S; Rodriguez Coira, G; Shangguan, J; Shimizu, T; Scheithauer, S; Smith, HA; Stadler, J; Stern, DK; Straub, O; Straubmeier, C; Sturm, E; Tacconi, LJ; Vincent, F; von Fellenberg, S; Waisberg, I; Widmann, F; Wieprecht, E; Wiezorrek, E; Willner, SP; Witzel, G; Woillez, J; Yazici, S; Young, A; Zhang, S; Zins, G;

Publicação
ASTRONOMY & ASTROPHYSICS

Abstract
We report the time-resolved spectral analysis of a bright near-infrared and moderate X-ray flare of Sgr A(*). We obtained light curves in the M, K, and H bands in the mid- and near-infrared and in the 2 - 8 keV and 2 - 70 keV bands in the X-ray. The observed spectral slope in the near-infrared band is nu L-nu proportional to proportional to nu(0.5 +/- 0.2); the spectral slope observed in the X-ray band is nu L-nu proportional to nu(-0.7 +/- 0.5). Using a fast numerical implementation of a synchrotron sphere with a constant radius, magnetic field, and electron density (i.e., a one-zone model), we tested various synchrotron and synchrotron self-Compton scenarios. The observed near-infrared brightness and X-ray faintness, together with the observed spectral slopes, pose challenges for all models explored. We rule out a scenario in which the near-infrared emission is synchrotron emission and the X-ray emission is synchrotron self-Compton. Two realizations of the one-zone model can explain the observed flare and its temporal correlation: one-zone model in which the near-infrared and X-ray luminosity are produced by synchrotron self-Compton and a model in which the luminosity stems from a cooled synchrotron spectrum. Both models can describe the mean spectral energy distribution (SED) and temporal evolution similarly well. In order to describe the mean SED, both models require specific values of the maximum Lorentz factor gamma(max), which differ by roughly two orders of magnitude. The synchrotron self-Compton model suggests that electrons are accelerated to gamma(max)similar to 500, while cooled synchrotron model requires acceleration up to gamma(max)similar to 5 x 10(4). The synchrotron self-Compton scenario requires electron densities of 10(10) cm(-3) that are much larger than typical ambient densities in the accretion flow. Furthermore, it requires a variation of the particle density that is inconsistent with the average mass-flow rate inferred from polarization measurements and can therefore only be realized in an extraordinary accretion event. In contrast, assuming a source size of 1 R-S, the cooled synchrotron scenario can be realized with densities and magnetic fields comparable with the ambient accretion flow. For both models, the temporal evolution is regulated through the maximum acceleration factor gamma(max), implying that sustained particle acceleration is required to explain at least a part of the temporal evolution of the flare.

2021

Stochastic Planning and Operational Constraint Assessment of System-Customer Power Supply Risks in Electricity Distribution Networks

Autores
Mikka Kisuule; Ignacio Hernando-Gil; Jonathan Serugunda; Jane Namaganda-Kiyimba; Mike Brian Ndawula;

Publicação
Sustainability

Abstract
Electricity-distribution network operators face several operational constraints in the provision of safe and reliable power given that investments for network area reinforcement must be commensurate with improvements in network reliability. This paper provides an integrated approach for assessing the impact of different operational constraints on distribution-network reliability by incorporating component lifetime models, time-varying component failure rates, as well as the monetary cost of customer interruptions in an all-inclusive probabilistic methodology that applies a time-sequential Monte Carlo simulation. A test distribution network based on the Roy Billinton test system was modelled to investigate the system performance when overloading limits are exceeded as well as when preventive maintenance is performed. Standard reliability indices measuring the frequency and duration of interruptions and the energy not supplied were complemented with a novel monetary reliability index. The comprehensive assessment includes not only average indices but also their probability distributions to adequately describe the risk of customer interruptions. Results demonstrate the effectiveness of this holistic approach, as the impacts of operational decisions are assessed from both reliability and monetary perspectives. This informs network planning decisions through optimum investments and consideration of customer outage costs.

2021

Low-cost 3D LIDAR-based scanning system for small objects

Autores
Neto, JAB; Lima, JL; Pereira, AI; Costa, P;

Publicação
2021 22ND IEEE INTERNATIONAL CONFERENCE ON INDUSTRIAL TECHNOLOGY (ICIT)

Abstract
Three-dimensional scanning is a task that is highly important for our modern society and this is translated by a wide area of knowledge that contains numerous approaches to this task. As this process is non-trivial, most of the technologies are expensive, with even the low-cost ones being a great investment for the regular user. Therefore, this work presents a low-cost LIDAR-based 3D scanning system that can perform 3D scans of small objects and reconstruct their digital STL models. The system consists of one rotating platform and a scanning arc-shaped structure, which both are actuated by stepper motors.

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