Abstract
The estimation of atmospheric turbulence parameters is of relevance for the following: (a) site evaluation and characterization; (b) prediction of the point spread function; (c) live assessment of error budgets and optimization of adaptive optics performance; (d) optimization of fringe trackers for long baseline optical interferometry. The ubiquitous deployment of Shack-Hartmann wavefront sensors in large telescopes makes them central for atmospheric turbulence parameter estimation via adaptive optics telemetry. Several methods for the estimation of the Fried parameter and outer scale have been developed, most of which are based on the fitting of Zernike polynomial coefficient variances reconstructed from the telemetry. The non-orthogonality of Zernike polynomial derivatives introduces modal cross coupling, which affects the variances. Furthermore, the finite resolution of the sensor introduces aliasing. In this article the impact of these effects on atmospheric turbulence parameter estimation is addressed with simulations. It is found that cross-coupling is the dominant bias. An iterative algorithm to overcome it is presented. Simulations are conducted for typical ranges of the outer scale (4-32 m), Fried parameter (10 cm) and noise in the variances (signal-to-noise ratio of 10 and above). It is found that, using the algorithm, both parameters are recovered with sub-per cent accuracy.

Abstract
We found stable soliton solutions for two generalizations of the cubic complex Ginzburg-Landau equation, namely, one that includes the term that, in optics, represents a delayed response of the nonlinear gain and the other including the self-steepening term, also in the optical context. These solutions do not require the presence of the delayed response of the nonlinear refractive index, such that, they exist regardless of the term previously considered essential for stabilization. The existence of these solitons was predicted by a perturbation approach, and then confirmed by solving the ordinary differential equations, resulting from a similarity reduction, and also by applying a linear stability analysis. We found that these solitons exist for a large region of the parameter space and possess very asymmetric amplitude profiles as well as a complicated chirp characteristic.

Abstract
We study the electromagnetically induced transparency (EIT) phenomenon in a hollow-core fibre filled with rubidium gas. We analyse the impact of the guiding effect and of the temperature on the properties of the EIT phenomenon. The refractive index felt by the probe laser is found to vary due to the radial dependence of the fibre mode field at the pump frequency. Several results are presented for the transmission, dispersion, and group velocity of the probe field, considering both the free propagation regime and the guided propagation along the hollow-core fibre. We note that the EIT occurring in a waveguide has a great potential for practical applications since it can be controlled by adjusting the gas and the fibre properties.

Abstract
We study the time-dependent behavior of dissipative solitons (DSs) stabilized by nonlinear gradient terms. Two cases are investigated: first, the case of the presence of a Raman term, and second, the simultaneous presence of two nonlinear gradient terms, the Raman term and the dispersion of nonlinear gain. As possible types of time-dependence, we find a number of different possibilities including periodic behavior, quasi-periodic behavior, and also chaos. These different types of time-dependence are found to form quite frequently from a window structure of alternating behavior, for example, of periodic and quasi-periodic behaviors. To analyze the time dependence, we exploit extensively time series and Fourier transforms. We discuss in detail quantitatively the question whether all the DSs found for the cubic complex Ginzburg-Landau equation with nonlinear gradient terms are generic, meaning whether they are stable against structural perturbations, for example, to the additions of a small quintic perturbation as it arises naturally in an envelope equation framework. Finally, we examine to what extent it is possible to have different types of DSs for fixed parameter values in the equation by just varying the initial conditions, for example, by using narrow and high vs broad and low amplitudes. These results indicate an overlapping multi-basin structure in parameter space. Published under an exclusive license by AIP Publishing.

Abstract
Evaluating diffusion properties of novel optical clearing (OC) agents is critical for advancing medical imaging. Tartrazine (TTZ), a strong absorbing dye, has shown promise in enhancing tissue transparency, yet its diffusion properties remain uncharacterized. In this work, OC treatments with TTZ-water solutions with varying osmolarities were performed, and the diffusion times (tau) that characterize the tissue dehydration and the RI matching mechanisms were estimated. From kinetic T-c measurements during treatment, tau values of water and TTZ were estimated in muscles as 60.0 s and 416.0 s, respectively. Corresponding diffusion coefficients (D) were derived from sample thickness data measured during treatments where the unique fluxes of TTZ and water occur. The respective D values were then calculated as 1.9 x 10(-6) cm(2)/s for water and 3.6 x 10(-7) cm(2)/s for TTZ. These findings provide key insights into TTZ diffusion in skeletal muscle and support its potential as an effective OC agent.

Abstract
Modulation instability (MI) of the continuous wave (cw) has been associated with the onset of stable solitons in conservative and dissipative systems. The cubic complex Ginzburg-Landau equation (CGLE) is a prototype of a damped, driven, nonlinear, and dispersive system. The inclusion of nonlinear gradients is essential to stabilize pulses whether stationary or oscillatory. The soliton solutions of this model have been reasonably studied; however, its cw solution characteristics and stability have not been reported yet. Here, we obtain the cw solutions of the cubic CGLE with nonlinear gradient terms and study its short- and long-term evolution under the effect of small perturbations. We have found that, for each admissible amplitude, there are two branches of cw solutions, and all of them are unstable. Then, through direct integration of the evolution equation, we study the evolution of those cw solutions, observing the emergence of plain and oscillatory solitons. Depending on whether the cw and/or its perturbation are sinusoidal, we can obtain a train of a finite number of pulses or bound states.