2021
Autores
Pedrosa, J; Aresta, G; Ferreira, C; Mendonca, A; Campilho, A;
Publicação
PROCEEDINGS OF THE 15TH INTERNATIONAL JOINT CONFERENCE ON BIOMEDICAL ENGINEERING SYSTEMS AND TECHNOLOGIES (BIOIMAGING), VOL 2
Abstract
Chest radiography is one of the most ubiquitous medical imaging exams used for the diagnosis and follow-up of a wide array of pathologies. However, chest radiography analysis is time consuming and often challenging, even for experts. This has led to the development of numerous automatic solutions for multipathology detection in chest radiography, particularly after the advent of deep learning. However, the black-box nature of deep learning solutions together with the inherent class imbalance of medical imaging problems often leads to weak generalization capabilities, with models learning features based on spurious correlations such as the aspect and position of laterality, patient position, equipment and hospital markers. In this study, an automatic method based on a YOLOv3 framework was thus developed for the detection of markers and written labels in chest radiography images. It is shown that this model successfully detects a large proportion of markers in chest radiography, even in datasets different from the training source, with a low rate of false positives per image. As such, this method could be used for performing automatic obscuration of markers in large datasets, so that more generic and meaningful features can be learned, thus improving classification performance and robustness.
2024
Autores
Ferreira, CA; Sousa, C; Marques, ID; Sousa, P; Ramos, I; Coimbra, M; Campilho, A;
Publicação
SCIENTIFIC DATA
Abstract
Given the high prevalence of lung cancer, an accurate diagnosis is crucial. In the diagnosis process, radiologists play an important role by examining numerous radiology exams to identify different types of nodules. To aid the clinicians' analytical efforts, computer-aided diagnosis can streamline the process of identifying pulmonary nodules. For this purpose, medical reports can serve as valuable sources for automatically retrieving image annotations. Our study focused on converting medical reports into nodule annotations, matching textual information with manually annotated data from the Lung Nodule Database (LNDb)-a comprehensive repository of lung scans and nodule annotations. As a result of this study, we have released a tabular data file containing information from 292 medical reports in the LNDb, along with files detailing nodule characteristics and corresponding matches to the manually annotated data. The objective is to enable further research studies in lung cancer by bridging the gap between existing reports and additional manual annotations that may be collected, thereby fostering discussions about the advantages and disadvantages between these two data types.
2024
Autores
Ferreira, ICA; Venkadesh, KV; Jacobs, C; Coimbra, M; Campilho, A;
Publicação
BIOMEDICAL SIGNAL PROCESSING AND CONTROL
Abstract
Objective: This study aims to forecast the progression of lung cancer by estimating the future diameter of lung nodules. Methods: This approach uses as input the tabular data, axial images from tomography scans, and both data types, employing a ResNet50 model for image feature extraction and direct analysis of patient information for tabular data. The data are processed through a neural network before prediction. In the training phase, class weights are assigned based on the rarity of different types of nodules within the dataset, in alignment with nodule management guidelines. Results: Tabular data alone yielded the most accurate results, with a mean absolute deviation of 0.99 mm. For malignant nodules, the best performance, marked by a deviation of 2.82 mm, was achieved using tabular data applying Lung-RADS class weights during training. The tabular data results highlight the influence of using the initial nodule size as an input feature. These results surpass the literature reference of 348-day volume doubling time for malignant nodules. Conclusion: The developed predictive model is optimized for integration into a clinical workflow after detecting, segmenting, and classifying nodules. It provides accurate growth forecasts, establishing a more objective basis for determining follow-up intervals. Significance: With lung cancer's low survival rates, the capacity for precise nodule growth prediction represents a significant breakthrough. This methodology promises to revolutionize patient care and management, enhancing the chances for early risk assessment and effective intervention.
2024
Autores
Ferreira, CA; Ramos, I; Coimbra, M; Campilho, A;
Publicação
2024 IEEE 22ND MEDITERRANEAN ELECTROTECHNICAL CONFERENCE, MELECON 2024
Abstract
Lung cancer represents a significant health concern necessitating diligent monitoring of individuals at risk. While the detection of pulmonary nodules warrants clinical attention, not all cases require immediate surgical intervention, often calling for a strategic approach to follow-up decisions. The Lung-RADS guideline serves as a cornerstone in clinical practice, furnishing structured recommendations based on various nodule characteristics, including size, calcification, and texture, outlined within established reference tables. However, the reliance on labor-intensive manual measurements underscores the potential advantages of integrating decision support systems into this process. Herein, we propose a feature-based methodology aimed at enhancing clinical decision-making by automating the assessment of nodules in computed tomography scans. Leveraging algorithms tailored for nodule calcification, texture analysis, and segmentation, our approach facilitates the automated classification of follow-up recommendations aligned with Lung-RADS criteria. Comparison with a previously reported end-to-end image-based classification method revealed competitive performance, with the feature-based approach achieving an accuracy of 0.701 +/- 0.026, while the end-to-end method attained 0.727 +/- 0.020. The inherent explainability of the feature-based approach offers distinct advantages, allowing clinicians to scrutinize and modify individual features to address disagreements or rectify inaccuracies, thereby tailoring follow-up recommendations to patient profiles.
2020
Autores
Pedrosa, J; Aresta, G; Ferreira, CA; Rodrigues, M; Leitão, P; Carvalho, AS; Rebelo, J; Negrão, E; Ramos, I; Cunha, A; Campilho, A;
Publicação
Abstract
2022
Autores
Pedrosa, J; Aresta, G; Ferreira, CA; Rodrigues, M; Leitão, P; Carvalho, AS; Rebelo, J; Negrão, E; Ramos, I; Cunha, A; Campilho, A;
Publicação
Abstract
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