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Publications

2025

The molecular impact of cigarette smoking resembles aging across tissues

Authors
Ramirez, JM; Ribeiro, R; Soldatkina, O; Moraes, A; García-Pérez, R; Ferreira, PG; Melé, M;

Publication
Genome Medicine

Abstract
Background: Tobacco smoke is the main cause of preventable mortality worldwide. Smoking increases the risk of developing many diseases and has been proposed as an aging accelerator. Yet, the molecular mechanisms driving smoking-related health decline and aging acceleration in most tissues remain unexplored. Methods: Here, we use data from the Genotype-Tissue Expression Project (GTEx) to perform a characterization of the effect of cigarette smoking across human tissues. We perform a multi-tissue analysis across 46 human tissues. Our multi-omics characterization includes analysis of gene expression, alternative splicing, DNA methylation, and histological alterations. We further analyze ex-smoker samples to assess the reversibility of these molecular alterations upon smoking cessation. Results: We show that smoking impacts tissue architecture and triggers systemic inflammation. We find that in many tissues, the effects of smoking significantly overlap those of aging. Specifically, both age and smoking upregulate inflammatory genes and drive hypomethylation at enhancers (odds ratio (OR) = 2). In addition, we observe widespread smoking-driven hypermethylation at target regions of the Polycomb repressive complex (OR = 2), which is a well-known aging effect. Smoking-induced epigenetic changes overlap causal aging CpGs, suggesting that these methylation changes may directly mediate the aging acceleration observed in smokers. Finally, we find that smoking effects that are shared with aging are more persistent over time. Conclusion: Overall, our multi-tissue and multi-omic analysis of the effects of cigarette smoking provides an extensive characterization of the impact of tobacco smoke across tissues and unravels the molecular mechanisms driving smoking-induced tissue homeostasis decline and aging acceleration. © The Author(s) 2025.

2025

A platform sandbox for the assessment of municipal sustainable development goals

Authors
Ferreira, F; Briga, P; Teixeira, SR; Almeida, F;

Publication
JOURNAL OF ENGINEERING DESIGN AND TECHNOLOGY

Abstract
PurposeThis study aims to present an innovative sandbox platform that implements a decision support system (DSS) to assess the sustainable development goals (SDGs) addressed at the municipal level. It intends to determine the relative importance of each SDG in municipalities and explore the synergies that can be discovered among them. Design/methodology/approachParticipatory action research is used to develop a DSS and an algorithm designated as discrete heavy fuzzy was also developed, which extends the Apriori algorithm to include discrete quantitative assessments of the level of SDG compliance by each project. A scenario consisting of three municipalities in Portugal (i.e. Porto, Loule and Castelo de Vide) was chosen to demonstrate the implementation of the sandbox platform and to interpret the observed results. FindingsThe results reveal significant differences in the typology of SDGs addressed by each municipality. It was found that municipal sustainable projects are strongly influenced by the contextual factors of each municipality. Porto has projects that address the first five SDGs. Loule appears projects that promote innovation, the fight against climate change and the development of sustainable cities. Castelo de Vida has initiatives related to innovation and infrastructure and decent work and economic growth. Research limitations/implicationsThis study provides knowledge about the relative importance of the SDGs in Portuguese municipalities and explores the synergies among them. The proposed sandbox platform fills the gaps of the ODSlocal Webtool by proposing a dynamic and interactive approach for the exploration of quantitative indicators regarding the implementation status of the SDGs established in the 2030 Agenda. Originality/valueThis study provides knowledge about the relative importance of the SDGs and the various synergies that exist between them considering the Portuguese municipalities. The sandbox platform presented and developed within this study allows filling the gaps of the ODSlocal Webtool that gathers essentially qualitative information about each project and offers a dynamic and interactive exploration with quantitative indicators of the implementation status of the SDGs established in the 2030 Agenda.

2025

Budget-Constrained Collaborative Renewable Energy Forecasting Market

Authors
Gonçalves, C; Bessa, RJ; Teixeira, T; Vinagre, J;

Publication
IEEE TRANSACTIONS ON SUSTAINABLE ENERGY

Abstract
Accurate power forecasting from renewable energy sources (RES) is crucial for integrating additional RES capacity into the power system and realizing sustainability goals. This work emphasizes the importance of integrating decentralized spatio-temporal data into forecasting models. However, decentralized data ownership presents a critical obstacle to the success of such spatio-temporal models, and incentive mechanisms to foster data-sharing need to be considered. The main contributions are a) a comparative analysis of the forecasting models, advocating for efficient and interpretable spline LASSO regression models, and b) a bidding mechanism within the data/analytics market to ensure fair compensation for data providers and enable both buyers and sellers to express their data price requirements. Furthermore, an incentive mechanism for time series forecasting is proposed, effectively incorporating price constraints and preventing redundant feature allocation. Results show significant accuracy improvements and potential monetary gains for data sellers. For wind power data, an average root mean squared error improvement of over 10% was achieved by comparing forecasts generated by the proposal with locally generated ones.

2025

High-Birefringence and Quarter-Wave Plates at 1550 nm Using Azopolymers

Authors
Soares, B; Silva, S; Ribeiro, P; Frazao, O;

Publication
IEEE PHOTONICS TECHNOLOGY LETTERS

Abstract
Azobenzenes are a class of compounds which allow the writing and erasure of linear birefringence along any desired direction, through their ability to photoisomerize. This property enables applications requiring polarization control, which, despite extensive exploration in the visible spectrum, have yet to be fully capitalized in the infrared region. This study aims to systematically characterize the creation and relaxation of induced linear birefringence dynamics in azopolymers thin films for the 1550 nm region. Maximum birefringence values as high as 6.02 x 10(-2) were attained during the recording phase with a 445 nm pump laser, that stabilized at 5.40 x 10(-2) during the relaxation phase, achieved for a 2.4 mu m sample. In addition, a maximum phase shift of Delta Phi = 0.54 pi stabilizing at Delta Phi = 0.50 pi, was observed for a 9.7 mu m sample with a 532 nm writing laser. Accordingly, this shows the promising potential of azopolymers for many applications.

2025

Frontiers of the Past in the Digital World: Multidisciplinary Collaboration in the 3D Reconstitution of Medieval Border Towns

Authors
Lacet, D; Gómez, FC; Prata, S; Trindade, L; da Silva, GM; Costa, A; Zeller, Mv; Morgado, L; Coelho, A; Alves, T; Filipe, J;

Publication
IEEE Conference on Virtual Reality and 3D User Interfaces, VR 2025 - Abstracts and Workshops, Saint Malo, France, March 8-12, 2025

Abstract
The virtual reconstitution of Castelo de Vide, Portugal, within the FRONTOWNS project, highlights the challenges and successes of multidisciplinary collaboration in heritage preservation through 3D modeling. The goal was to reconstruct the town's urban evolution, focusing on its role as a border settlement from the 13th to 16th centuries. The project combined archaeological evidence, historical sources, and digital technologies like photogrammetry and 3D scanning. Co-creation workshops aligned diverse knowledge, leading to creative solutions that balanced historical accuracy and technical feasibility. Despite budget constraints, it produced a high-quality digital reconstitution with insights for future virtual heritage projects.

2025

The SAIL dataset of marine atmospheric electric field observations over the Atlantic Ocean

Authors
Barbosa, S; Dias, N; Almeida, C; Amaral, G; Ferreira, A; Camilo, A; Silva, E;

Publication
EARTH SYSTEM SCIENCE DATA

Abstract
A unique dataset of marine atmospheric electric field observations over the Atlantic Ocean is described. The data are relevant not only for atmospheric electricity studies, but more generally for studies of the Earth's atmosphere and climate variability, as well as space-Earth interaction studies. In addition to the atmospheric electric field data, the dataset includes simultaneous measurements of other atmospheric variables, including gamma radiation, visibility, and solar radiation. These ancillary observations not only support interpretation and understanding of the atmospheric electric field data, but also are of interest in themselves. The entire framework from data collection to final derived datasets has been duly documented to ensure traceability and reproducibility of the whole data curation chain. All the data, from raw measurements to final datasets, are preserved in data repositories with a corresponding assigned DOI. Final datasets are available from the Figshare repository (https://figshare.com/projects/SAIL_Data/178500, ), and computational notebooks containing the code used at every step of the data curation chain are available from the Zenodo repository (https://zenodo.org/communities/sail, Project SAIL community, 2025).

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