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Publications

2017

Feature extraction for the author name disambiguation problem in a bibliographic database

Authors
Silva, JMB; Silva, FMA;

Publication
SAC

Abstract
Author name disambiguation in bibliographic databases has been, and still is, a challenging research task due to the high uncertainty there is when matching a publication author with a concrete researcher. Common approaches normally either resort to clustering to group author's publications, or use a binary classifier to decide whether a given publication is written by a specific author. Both approaches benefit from authors publishing similar works (e.g. subject areas and venues), from the previous publication history of an author (the higher, the better), and validated publicationauthor associations for model creation. However, whenever such an algorithm is confronted with different works from an author, or an author without publication history, often it makes wrong identifications. In this paper, we describe a feature extraction method that aims to avoid the previous problems. Instead of generally characterizing an author, it selectively uses features that associate the author to a certain publication. We build a Random Forest model to assess the quality of our set of features. Its goal is to predict whether a given author is the true author of a certain publication. We use a bibliographic database named Authenticus with more than 250, 000 validated author-publication associations to test model quality. Our model achieved a top result of 95.37% accuracy in predicting matches and 91.92% in a real test scenario. Furthermore, in the last case the model was able to correctly predict 61.86% of the cases where authors had no previous publication history.

2017

Maize participatory breeding in Portugal: Comparison of farmer's and breeder's on-farm selection

Authors
Mendes Moreira, P; Satovic, Z; Mendes Moreira, J; Santos, JP; Nina Santos, JPN; Pego, S; Vaz Patto, MCV;

Publication
PLANT BREEDING

Abstract
VASO is a Portuguese participatory maize breeding project (1984), where several maize landraces such as Pigarro have been selected both by a farmer's (phenotypic recurrent selection) and a breeder's approach (S2 lines recurrent selection). The objectives of this study were to determine the phenotypic and genotypic responses to participatory selection using these two different approaches, to clarify to which extent both selection methods preserve genetic diversity, and conclude what is the preferred method to apply in sustainable farming systems. The results, obtained via ANOVA, regression analyses and molecular markers, indicate that for both selection methods, genetic diversity was not significantly reduced, even with the most intensive breeder's selection. Although there were some common outputs, such as the determinated versus indeterminated ears, cob and ear weight ratio per ear and rachis 2, specific phenotypic traits evolved in opposite directions between the two selection approaches. Yield increase was only detected during farmer selection, indicating its interest on PPB. Candidate genes were identified for a few of the traits under selection as potential functional markers in participatory plant breeding.

2017

Fine-to-Coarse Ranking in Ordinal and Imbalanced Domains: An Application to Liver Transplantation

Authors
Pérez Ortiz, M; Fernandes, K; Cruz, R; Cardoso, JS; Briceño, J; Hervás Martínez, C;

Publication
ADVANCES IN COMPUTATIONAL INTELLIGENCE, IWANN 2017, PT II

Abstract
Nowadays imbalanced learning represents one of the most vividly discussed challenges in machine learning. In these scenarios, one or some of the classes in the problem have a significantly lower a priori probability, usually leading to trivial or non-desirable classifiers. Because of this, imbalanced learning has been researched to a great extent by means of different approaches. Recently, the focus has switched from binary classification to other paradigms where imbalanced data also arise, such as ordinal classification. This paper tests the application of learning pairwise ranking with multiple granularity levels in an ordinal and imbalanced classification problem where the aim is to construct an accurate model for donor-recipient allocation in liver transplantation. Our experiments show that approaching the problem as ranking solves the imbalance issue and leads to a competitive performance.

2017

Mobility Mining Using Nonnegative Tensor Factorization

Authors
Nosratabadi, HE; Fanaee T, H; Gama, J;

Publication
PROGRESS IN ARTIFICIAL INTELLIGENCE (EPIA 2017)

Abstract
Mobility mining has lots of applications in urban planning and transportation systems. In particular, extracting mobility patterns enables service providers to have a global insight about the mobility behaviors which consequently leads to providing better services to the citizens. In the recent years several data mining techniques have been presented to tackle this problem. These methods usually are either spatial extension of temporal methods or temporal extension of spatial methods. However, still a framework that can keep the natural structure of mobility data has not been considered. Non-negative tensor factorizations (NNTF) have shown great applications in topic modelling and pattern recognition. However, unfortunately their usefulness in mobility mining is less explored. In this paper we propose a new mobility pattern mining framework based on a recent non-negative tensor model called BetaNTF. We also present a new approach based on interpretability concept for determination of number of components in the tensor rank selection process. We later demonstrate some meaningful mobility patterns extracted with the proposed method from bike sharing network mobility data in Boston, USA.

2017

Bringing together UAS-based land surveying and procedural modelling of buildings to set up enhanced VR environments for cultural heritage

Authors
Adao, T; Padua, L; Hruska, J; Peres, E; Sousa, JJ; Morais, R; Magalhaes, LG;

Publication
2017 24 ENCONTRO PORTUGUES DE COMPUTACAO GRAFICA E INTERACAO (EPCGI)

Abstract
A methodology to rapidly produce environments that combine the intuition of in situ augmented reality (AR) with the commodity of virtual reality (VR) is proposed in this paper, by bringing together unmanned aerial systems (UAS) imagery and procedural modelling. While fully synthesized environments provide a very accurate visualization of the conserved parts of the real-world, missing parts - namely ruins - can be complemented with procedurally modelled structures. Regarding methodology's steps, firstly, a UAS flight mission gathers georeferenced imagery data about the site of interest. Then, the image set is converted to an accurate 3D model of the referred site, through photogrammetry. By considering the geographic information that also results from the previous process, ruins are manually outlined for georeferencing purposes. To complement ruins' missing information, virtual models of buildings are produced too, in a procedural modelling tool. Finally, at the full VR environment setup step, all elements are imported and subjected to geometric transformations that aim to match the procedurally modelled buildings with the outlined ruins. To improve the insight about the process work-flow, system's architecture and implementation are presented along with a case-study regarding a historically relevant site - Vila Velha's city gates (Vila Real, Portugal) - and preliminary results.

2017

Distributed in-network processing and resource optimization over mobile-health systems

Authors
Awad, A; Mohamed, A; Chiasserini, C; Elfouly, T;

Publication
Journal of Network and Computer Applications

Abstract

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