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Publicações

2018

A Weakly-Supervised Framework for Interpretable Diabetic Retinopathy Detection on Retinal Images

Autores
Costa, P; Galdran, A; Smailagic, A; Campilho, A;

Publicação
IEEE ACCESS

Abstract
Diabetic retinopathy (DR) detection is a critical retinal image analysis task in the context of early blindness prevention. Unfortunately, in order to train a model to accurately detect DR based on the presence of different retinal lesions, typically a dataset with medical expert's annotations at the pixel level is needed. In this paper, a new methodology based on the multiple instance learning (MIL) framework is developed in order to overcome this necessity by leveraging the implicit information present on annotations made at the image level. Contrary to previous MIL-based DR detection systems, the main contribution of the proposed technique is the joint optimization of the instance encoding and the image classification stages. In this way, more useful mid-level representations of pathological images can be obtained. The explainability of the model decisions is further enhanced by means of a new loss function enforcing appropriate instance and mid-level representations. The proposed technique achieves comparable or better results than other recently proposed methods, with 90% area under the receiver operating characteristic curve (AUC) on Messidor, 93% AUC on DR1, and 96% AUC on DR2, while improving the interpretability of the produced decisions.

2018

atSNPInfrastructure, a Case Study for Searching Billions of Records While Providing Significant Cost Savings over Cloud Providers

Autores
Harrison, C; Keles, S; Hudson, R; Shin, S; Dutra, I;

Publicação
IPDPS Workshops

Abstract
We explore the feasibility of a database storage engine housing up to 307 billion genetic Single Nucleotide Polymorphisms (SNP) for online access. We evaluate database storage engines and implement a solution utilizing factors such as dataset size, information gain, cost and hardware constraints. Our solution provides a full feature functional model for scalable storage and query-ability for researchers exploring the SNP's in the human genome. We address the scalability problem by building physical infrastructure and comparing final costs to a major cloud provider.

2018

Impact of tertiary reserve sharing in Portugal

Autores
Frade, PMS; Santana, JJE; Shafie khah, M; Catalao, JPS;

Publicação
UTILITIES POLICY

Abstract
Ancillary services play a fundamental role in the operation of electricity systems. In the Iberian Peninsula, since mid-2014, ancillary services have gained a transnational dimension, namely through the introduction of cross border balancing replacement reserves between the Portuguese and the Spanish Transmission System Operators (TSOs). This paper evaluates the impact of replacement reserves on the Portuguese electricity system, from the onset of this mechanism until the end of 2017, as a new contribution to earlier studies. It also describes the pecuniary impact of tertiary transactions, the identification, and categorization of possible different scenarios of tertiary mobilization, and the respective impact on the internal tertiary mobilization. On the one hand, the Iberian electricity system is one of the most influenced by a high penetration of intermittent renewables, and therefore one of the best candidates to experience increased benefits from the platform. On the other hand, the Portuguese TSO is one of the most peripheral TSOs in Europe that benefits more from the market integration in various dimensions of the electricity sector.

2018

A clinical risk matrix for obstructive sleep apnea using Bayesian network approaches

Autores
Ferreira-Santos, D; Rodrigues, PP;

Publicação
International Journal of Data Science and Analytics

Abstract

2018

A New Active Contours Approach for Finger Extensor Tendon Segmentation in Ultrasound Images Using Prior Knowledge and Phase Symmetry

Autores
Martins, N; Sultan, S; Veiga, D; Ferreira, M; Teixeira, F; Coimbra, M;

Publicação
IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS

Abstract
This work proposes a new approach for the segmentation of the extensor tendon in ultrasound images of the second metacarpophalangeal joint (MCPJ). The MCPJ is known to be frequently involved in early stages of rheumatic diseases like rheumatoid arthritis. The early detection and follow up of these diseases is important to start and adapt the treatments properly and, in that way, preventing irreversible damage of the joints. This work relies on an active contours framework, preceded by a phase symmetry preprocessing and with prior knowledge energies, to automatically identify the extensor tendon. Active contours methods are widely used in ultrasound images because of their robustness to speckle noise and ability to join unconnected smaller regions into a coherent shape. The tendon is formulated as a line so open ended active contours were used. Phase symmetry highlights the tendon, by setting a proper scale range and angle span. The distance between structures and the tendon slope were also included to enforce the model based on anatomical characteristics. And finally, the concavity measures were used because, given the anatomy of the finger, we know that the tendon line should have less than two concavities. To solve the active contours energy minimization a genetic algorithm approach was used. Several energy metric configurations were compared using the modified Hausdorff distance and results showed that this segmentation is not only possible, but exhibits errors smaller than 0.5 mm with a confidence of 95% with the phase symmetry preprocessing and energies based on the line neighborhood, area ratio, slope, and concavity measurements.

2018

Analysis and Detection of Unreliable Users in Twitter: Two Case Studies

Autores
Guimarães, N; Figueira, A; Torgo, L;

Publicação
IC3K

Abstract
The emergence of online social networks provided users with an easy way to publish and disseminate content, reaching broader audiences than previous platforms (such as blogs or personal websites) allowed. However, malicious users started to take advantage of these features to disseminate unreliable content through the network like false information, extremely biased opinions, or hate speech. Consequently, it becomes crucial to try to detect these users at an early stage to avoid the propagation of unreliable content in social networks’ ecosystems. In this work, we introduce a methodology to extract large corpus of unreliable posts using Twitter and two databases of unreliable websites (OpenSources and Media Bias Fact Check). In addition, we present an analysis of the content and users that publish and share several types of unreliable content. Finally, we develop supervised models to classify a twitter account according to its reliability. The experiments conducted using two different data sets show performance above 94% using Decision Trees as the learning algorithm. These experiments, although with some limitations, provide some encouraging results for future research on detecting unreliable accounts on social networks. © 2020, Springer Nature Switzerland AG.

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