2022
Authors
Martins, IS; Pinheiro, MR; Silva, HF; Tuchin, VV; Oliveira, LM;
Publication
2022 International Conference Laser Optics, ICLO 2022 - Proceedingss
Abstract
The evaluation of the diffusion properties of optical clearing agents in biological tissues, which are necessary to characterize the transparency mechanisms, has been traditionally made using ex vivo tissues. With the objective of performing such evaluation in vivo, this study was made to evaluate and compare those properties for propylene glycol in skeletal muscle, as obtained with the collimated transmittance and diffuse reflectance kinetics. The diffusion time and the diffusion coefficient of propylene glycol in the muscle that were calculated both from transmittance and reflectance kinetics presented a deviation of 0.8%, a result that opens the possibility to use such a method in vivo. © 2022 IEEE.
2022
Authors
Oliveira, LM; Goncalves, TM; Botelho, AR; Martins, IS; Silva, HF; Carneiro, I; Carvalho, S; Henrique, R; Tuchin, VV;
Publication
2022 International Conference Laser Optics, ICLO 2022 - Proceedingss
Abstract
The direct calculation of the absorption coefficient spectra of various tissues from spectral measurements allowed to retrieve the contents of melanin and lipofuscin. In the rabbit brain cortex, 1.8 times higher melanin content is explained by the neuron degeneration process. Similar melanin and lipofuscin contents were found in the rabbit pancreas as a result of the tissue aging process. The conversion of 83 % of the melanin in the human normal kidney into lipofuscin in the cancer kidney indicates that lipofuscin can be considered a kidney cancer marker in humans. © 2022 IEEE.
2022
Authors
Cavaco, R; Rodrigues, P; Lopes, T; Capela, D; Ferreira, MFS; Jorge, PAS; Silva, NA;
Publication
Journal of Physics: Conference Series
Abstract
Apart from radiation, which constitutes the primary source of information in laser-induced breakdown spectroscopy, the process is accompanied by secondary processes such as shock wave generation and sound emission. In this manuscript, we explore the possibility of relating plasma properties with the sound from the shock waves in multiple materials, from metals to minerals. By analyzing the behavior of shock wave sound from homogeneous reference metallic targets, we investigate the relation between plasma properties and sound signal, demonstrating that distinct materials and plasma characteristics correspond to distinct plasma sound fingerprints. © Published under licence by IOP Publishing Ltd.
2022
Authors
Rodrigues, P; Lopes, T; Cavaco, R; Capela, D; Ferreira, MFS; Jorge, PAS; Silva, NA;
Publication
Journal of Physics: Conference Series
Abstract
The possibility to map the element distribution on a sample surface is one of the interesting applications of laser-induced breakdown spectroscopy that has been extensively explored in recent years. In this manuscript, we explore the combination of photogrammetry and LIBS techniques for the creation of a three-dimensional model of the map of the elements on the surface of the sample. Using a dedicated photogrammetry solution and software, we reconstruct the three-dimensional model of the mineral sample whose mesh is later exploited for the interactive interpretation of the results. Then, making use of Paraview software, which integrates production algorithms and computing performance in a unified solution for scientific purposes, we establish a process pipeline that allows the creation of an interactive three-dimensional model with the spatial distribution of the target elements on top of the sample surface. Our results demonstrate that combining these two techniques can give us a valuable resource for better qualitative analysis and insight, providing an innovative three-dimensional modeling solution that may open the door to a new range of possibilities, from quality control technology involving alloys and mechanical parts to interactive teaching environments for geo and biosciences, just to name a few examples. © Published under licence by IOP Publishing Ltd.
2022
Authors
Martins, IS; Silva, HF; Tuchin, VV; Oliveira, LM;
Publication
PHOTONICS
Abstract
The pancreas is a highly important organ, since it produces insulin and prevents the occurrence of diabetes. Although rare, pancreatic cancer is highly lethal, with a small life expectancy after being diagnosed. The pancreas is one of the organs less studied in the field of biophotonics. With the objective of acquiring information that can be used in the development of future applications to diagnose and treat pancreas diseases, the spectral optical properties of the rabbit pancreas were evaluated in a broad-spectral range, between 200 and 1000 nm. The method used to obtain such optical properties is simple, based almost on direct calculations from spectral measurements. The optical properties obtained show similar wavelength dependencies to the ones obtained for other tissues, but a further analysis on the spectral absorption coefficient showed that the pancreas tissues contain pigments, namely melanin, and lipofuscin. Using a simple calculation, it was possible to retrieve similar contents of these pigments from the absorption spectrum of the pancreas, which indicates that they accumulate in the same proportion as a result of the aging process. Such pigment accumulation was camouflaging the real contents of DNA, hemoglobin, and water, which were precisely evaluated after subtracting the pigment absorption.
2022
Authors
Teixeira, J; Rocha, V; Oliveira, J; Jorge, PAS; Silva, NA;
Publication
Journal of Physics: Conference Series
Abstract
Optical trapping provides a way to isolate, manipulate, and probe a wide range of microscopic particles. Moreover, as particle dynamics are strongly affected by their shape and composition, optical tweezers can also be used to identify and classify particles, paving the way for multiple applications such as intelligent microfluidic devices for personalized medicine purposes, or integrated sensing for bioengineering. In this work, we explore the possibility of using properties of the forward scattered radiation of the optical trapping beam to analyze properties of the trapped specimen and deploy an autonomous classification algorithm. For this purpose, we process the signal in the Fourier domain and apply a dimensionality reduction technique using UMAP algorithms, before using the reduced number of features to feed standard machine learning algorithms such as K-nearest neighbors or random forests. Using a stratified 5-fold cross-validation procedure, our results show that the implemented classification strategy allows the identification of particle material with accuracies up to 80%, demonstrating the potential of using signal processing techniques to probe properties of optical trapped particles based on the forward scattered light. Furthermore, preliminary results of an autonomous implementation in a standard experimental optical tweezers setup show similar differentiation capabilities for real-time applications, thus opening some opportunities towards technological applications such as intelligent microfluidic devices and solutions for biochemical and biophysical sensing. © Published under licence by IOP Publishing Ltd.
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