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Publications

Publications by Aurélio Campilho

2018

A Weakly-Supervised Framework for Interpretable Diabetic Retinopathy Detection on Retinal Images

Authors
Costa, P; Galdran, A; Smailagic, A; Campilho, A;

Publication
IEEE ACCESS

Abstract
Diabetic retinopathy (DR) detection is a critical retinal image analysis task in the context of early blindness prevention. Unfortunately, in order to train a model to accurately detect DR based on the presence of different retinal lesions, typically a dataset with medical expert's annotations at the pixel level is needed. In this paper, a new methodology based on the multiple instance learning (MIL) framework is developed in order to overcome this necessity by leveraging the implicit information present on annotations made at the image level. Contrary to previous MIL-based DR detection systems, the main contribution of the proposed technique is the joint optimization of the instance encoding and the image classification stages. In this way, more useful mid-level representations of pathological images can be obtained. The explainability of the model decisions is further enhanced by means of a new loss function enforcing appropriate instance and mid-level representations. The proposed technique achieves comparable or better results than other recently proposed methods, with 90% area under the receiver operating characteristic curve (AUC) on Messidor, 93% AUC on DR1, and 96% AUC on DR2, while improving the interpretability of the produced decisions.

2018

Classification of Breast Cancer Histology Images Through Transfer Learning Using a Pre-trained Inception Resnet V2

Authors
Ferreira, CA; Melo, T; Sousa, P; Meyer, MI; Shakibapour, E; Costa, P; Campilho, A;

Publication
ICIAR

Abstract
Breast cancer is one of the leading causes of female death worldwide. The histological analysis of breast tissue allows for the differentiation of the tissue suspected to be abnormal into four classes: normal tissue, benign tumor, in situ carcinoma and invasive carcinoma. Automatic diagnostic systems can help in that task. In this sense, this work propose a deep neural network approach using transfer learning to classify breast cancer histology images. First, the added top layers are trained and a second fine-tunning is done on some feature extraction layers that are frozen previously. The used network is an Inception Resnet V2. In order to overcome the lack of data, data augmentation is performed too. This work is a suggested solution for the ICIAR 2018 BACH-Challenge and the accuracy is 0.76 in the blind test set.

2018

Image Analysis and Recognition - 15th International Conference, ICIAR 2018, Póvoa de Varzim, Portugal, June 27-29, 2018, Proceedings

Authors
Campilho, A; Karray, F; Haar Romeny, BMt;

Publication
ICIAR

Abstract

2018

Preface

Authors
Campilho, A; Karray, F; Ter Haar Romeny, B;

Publication
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Abstract

2018

Creation of Retinal Mosaics for Diabetic Retinopathy Screening: A Comparative Study

Authors
Melo, T; Mendonça, AM; Campilho, A;

Publication
ICIAR

Abstract
The creation of retinal mosaics from sets of fundus photographs can significantly reduce the time spent on the diabetic retinopathy (DR) screening, because through mosaic analysis the ophthalmologists can examine several portions of the eye at a single glance and, consequently, detect and grade DR more easily. Like most of the methods described in the literature, this methodology includes two main steps: image registration and image blending. In the registration step, relevant keypoints are detected on all images, the transformation matrices are estimated based on the correspondences between those keypoints and the images are reprojected into the same coordinate system. However, the main contributions of this work are in the blending step. In order to combine the overlapping images, a color compensation is applied to those images and a distance-based map of weights is computed for each one. The methodology is applied to two different datasets and the mosaics obtained for one of them are visually compared with the results of two state-of-the-art methods. The mosaics obtained with our method present good quality and they can be used for DR grading.

2018

Deep Convolutional Artery/Vein Classification of Retinal Vessels

Authors
Meyer, MI; Galdran, A; Costa, P; Mendonça, AM; Campilho, A;

Publication
ICIAR

Abstract
The classification of retinal vessels into arteries and veins in eye fundus images is a relevant task for the automatic assessment of vascular changes. This paper presents a new approach to solve this problem by means of a Fully-Connected Convolutional Neural Network that is specifically adapted for artery/vein classification. For this, a loss function that focuses only on pixels belonging to the retinal vessel tree is built. The relevance of providing the model with different chromatic components of the source images is also analyzed. The performance of the proposed method is evaluated on the RITE dataset of retinal images, achieving promising results, with an accuracy of 96 % on large caliber vessels, and an overall accuracy of 84 %.

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