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Publications

Publications by Carlos Manuel Soares

2009

Bioinspired Parameter Tuning of MLP Networks for Gene Expression Analysis: Quality of Fitness Estimates vs. Number of Solutions Analysed

Authors
Rossi, ALD; Soares, C; Carvalho, ACPLF;

Publication
ADVANCES IN NEURO-INFORMATION PROCESSING, PT II

Abstract
The values selected for the free parameters of Artificial Neural Networks usually have a high impact on their performance. As a result, several works investigate the use of optimization techniques, mainly metaheuristics, for the selection of values related to the network architecture, like number of hidden neurons, number of hidden layers, activation function, and to the learning algorithm, like learning rate, momentum coefficient, etc. A large number of these works use Genetic Algorithms for parameter optimization. Lately, other bioinspired optimization techniques, like Ant Colony optimization, Particle Swarm Optimization, among others, have been successfully used. Although bioinspired optimization techniques have been successfully adopted to tune neural networks parameter values, little is known about the relation between the quality of the estimates of the fitness of a solution used during the search process and the quality of the solution obtained by the optimization method. In this paper, we describe an empirical study on this issue. To focus our analysis, we restricted the datasets to the domain of gene expression analysis. Our results indicate that, although the computational power saved by using simpler estimation methods can be used to increase the number of solutions tested in the search process, the use of accurate estimates to guide that search is the most important factor to obtain good solutions.

2009

UCI plus plus : Improved Support for Algorithm Selection Using Datasetoids

Authors
Soares, C;

Publication
ADVANCES IN KNOWLEDGE DISCOVERY AND DATA MINING, PROCEEDINGS

Abstract
As companies employ a larger number of models, the problem of algorithm (and parameter) selection is becoming increasingly important. Two approaches to obtain empirical knowledge that is useful for that purpose are empirical studies and metalearning. However, most empirical (meta)knowledge is obtained from a, relatively small set, of datasets. In this paper, we propose a method to obtain a large number of datasets which is based on a simple transformation of existing datasets, referred to as datasetoids. We test our approach on the problem of using metalearning to predict when to prune decision trees. The results show significant; improvement when using datasetoids. Additionally, we identify a number of potential anomalies in the generated datasetoids and propose methods to solve them.

2001

Reducing rankings of classifiers by eliminating redundant classifiers

Authors
Brazdil, P; Soares, C; Pereira, R;

Publication
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Abstract
Several methods have been proposed to generate rankings of supervised classification algorithms based on their previous performance on other datasets [8,4]. Like any other prediction method, ranking methods will sometimes err, for instance, they may not rank the best algorithm in the first position. Often the user is willing to try more than one algorithm to increase the possibility of identifying the best one. The information provided in the ranking methods mentioned is not quite adequate for this purpose. That is, they do not identify those algorithms in the ranking that have reasonable possibility of performing best. In this paper, we describe a method for that purpose. We compare our method to the strategy of executing all algorithms and to a very simple reduction method, consisting of running the top three algorithms. In all this work we take time as well as accuracy into account. As expected, our method performs better than the simple reduction method and shows a more stable behavior than running all algorithms. © Springer-Verlag Berlin Heidelberg 2001.

2009

Meta-Learning

Authors
Carrier, CGG; Brazdil, P; Soares, C; Vilalta, R;

Publication
Encyclopedia of Data Warehousing and Mining, Second Edition (4 Volumes)

Abstract

2004

Using Meta-Learning to Support Data Mining

Authors
Vilalta, R; Carrier, CGG; Brazdil, P; Soares, C;

Publication
IJCSA

Abstract

1997

From Graphical Objects to Terms and Back: an Extended Application Framework for Prolog

Authors
Soares, C; Calejo, M;

Publication
Proceedings of the 8th Workshop on Logic Programming Environments, LPE '97, post-conference workshop at ICLP 1997, Leuven, Belgium, July 11, 1997

Abstract

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