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Publications

Publications by Jaime Cardoso

2025

CNN explanation methods for ordinal regression tasks

Authors
Barbero-Gómez, J; Cruz, RPM; Cardoso, JS; Gutiérrez, PA; Hervás-Martínez, C;

Publication
NEUROCOMPUTING

Abstract
The use of Convolutional Neural Network (CNN) models for image classification tasks has gained significant popularity. However, the lack of interpretability in CNN models poses challenges for debugging and validation. To address this issue, various explanation methods have been developed to provide insights into CNN models. This paper focuses on the validity of these explanation methods for ordinal regression tasks, where the classes have a predefined order relationship. Different modifications are proposed for two explanation methods to exploit the ordinal relationships between classes: Grad-CAM based on Ordinal Binary Decomposition (GradOBDCAM) and Ordinal Information Bottleneck Analysis (OIBA). The performance of these modified methods is compared to existing popular alternatives. Experimental results demonstrate that GradOBD-CAM outperforms other methods in terms of interpretability for three out of four datasets, while OIBA achieves superior performance compared to IBA.

2025

MST-KD: Multiple Specialized Teachers Knowledge Distillation for Fair Face Recognition

Authors
Caldeira, E; Cardoso, JS; Sequeira, AF; Neto, PC;

Publication
COMPUTER VISION-ECCV 2024 WORKSHOPS, PT XV

Abstract
As in school, one teacher to cover all subjects is insufficient to distill equally robust information to a student. Hence, each subject is taught by a highly specialised teacher. Following a similar philosophy, we propose a multiple specialized teacher framework to distill knowledge to a student network. In our approach, directed at face recognition use cases, we train four teachers on one specific ethnicity, leading to four highly specialized and biased teachers. Our strategy learns a project of these four teachers into a common space and distill that information to a student network. Our results highlighted increased performance and reduced bias for all our experiments. In addition, we further show that having biased/specialized teachers is crucial by showing that our approach achieves better results than when knowledge is distilled from four teachers trained on balanced datasets. Our approach represents a step forward to the understanding of the importance of ethnicity-specific features.

2025

Evaluating the Impact of Pulse Oximetry Bias in Machine Learning Under Counterfactual Thinking

Authors
Martins, I; Matos, J; Goncalves, T; Celi, LA; Wong, AKI; Cardoso, JS;

Publication
APPLICATIONS OF MEDICAL ARTIFICIAL INTELLIGENCE, AMAI 2024

Abstract
Algorithmic bias in healthcare mirrors existing data biases. However, the factors driving unfairness are not always known. Medical devices capture significant amounts of data but are prone to errors; for instance, pulse oximeters overestimate the arterial oxygen saturation of darker-skinned individuals, leading to worse outcomes. The impact of this bias in machine learning (ML) models remains unclear. This study addresses the technical challenges of quantifying the impact of medical device bias in downstream ML. Our experiments compare a perfect world, without pulse oximetry bias, using SaO(2) (blood-gas), to the actual world, with biased measurements, using SpO(2) (pulse oximetry). Under this counterfactual design, two models are trained with identical data, features, and settings, except for the method of measuring oxygen saturation: models using SaO(2) are a control and models using SpO(2) a treatment. The blood-gas oximetry linked dataset was a suitable testbed, containing 163,396 nearly-simultaneous SpO(2) - SaO(2) paired measurements, aligned with a wide array of clinical features and outcomes. We studied three classification tasks: in-hospital mortality, respiratory SOFA score in the next 24 h, and SOFA score increase by two points. Models using SaO(2) instead of SpO(2) generally showed better performance. Patients with overestimation of O-2 by pulse oximetry of >= 3% had significant decreases in mortality prediction recall, from 0.63 to 0.59, P < 0.001. This mirrors clinical processes where biased pulse oximetry readings provide clinicians with false reassurance of patients' oxygen levels. A similar degradation happened in ML models, with pulse oximetry biases leading to more false negatives in predicting adverse outcomes.

2024

Deep Learning-based Prediction of Breast Cancer Tumor and Immune Phenotypes from Histopathology

Authors
Gonçalves, T; Arias, DP; Willett, J; Hoebel, KV; Cleveland, MC; Ahmed, SR; Gerstner, ER; Cramer, JK; Cardoso, JS; Bridge, CP; Kim, AE;

Publication
CoRR

Abstract

2024

Weather and Meteorological Optical Range Classification for Autonomous Driving

Authors
Pereira, C; Cruz, RPM; Fernandes, JND; Pinto, JR; Cardoso, JS;

Publication
IEEE Trans. Intell. Veh.

Abstract

2022

A survey on attention mechanisms for medical applications: are we moving towards better algorithms?

Authors
Gonçalves, T; Torto, IR; Teixeira, LF; Cardoso, JS;

Publication
CoRR

Abstract
Abstract The increasing popularity of attention mechanisms in deep learning algorithms for computer vision and natural language processing made these models attractive to other research domains. In healthcare, there is a strong need for tools that may improve the routines of the clinicians and the patients. Naturally, the use of attention-based algorithms for medical applications occurred smoothly. However, being healthcare a domain that depends on high-stake decisions, the scientific community must ponder if these high-performing algorithms fit the needs of medical applications. With this motto, this paper extensively reviews the use of attention mechanisms in machine learning (including Transformers) for several medical applications. This work distinguishes itself from its predecessors by proposing a critical analysis of the claims and potentialities of attention mechanisms presented in the literature through an experimental case study on medical image classification with three different use cases. These experiments focus on the integrating process of attention mechanisms into established deep learning architectures, the analysis of their predictive power, and a visual assessment of their saliency maps generated by post-hoc explanation methods. This paper concludes with a critical analysis of the claims and potentialities presented in the literature about attention mechanisms and proposes future research lines in medical applications that may benefit from these frameworks.

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