2025
Authors
Nunes, JD; Montezuma, D; Oliveira, D; Pereira, T; Zlobec, I; Cardoso, JS;
Publication
2025 INTERNATIONAL JOINT CONFERENCE ON NEURAL NETWORKS, IJCNN
Abstract
Deep learning in computational pathology (CPath) has rapidly advanced in recent years. Research has primarily focused on enhancing accuracy and interpretability across various histology image analysis tasks, from tile-level to slide-level foundation models and novel multiple instance learning (MIL) strategies. However, it is equally important for models to provide well-calibrated confidence estimates. Due to factors such as dataset bias, overfitting, and limited training data, existing models tend to be overly confident on test sets. Promising solutions to address this issue include temperature scaling, a post-hoc method that adjusts logits using a single scalar value. However, the role of calibration in CPath is yet to be clarified. In this study, we evaluate temperature scaling and linear temperature scaling for CPath tasks, analyzing their impact on recalibration in both in-domain and out-of-domain distributions. The results show the limitations of current probability calibration techniques and motivate future work.
2025
Authors
Klöckner, P; Teixeira, J; Montezuma, D; Fraga, J; Horlings, HM; Cardoso, JS; Oliveira, SP;
Publication
NPJ DIGITAL MEDICINE
Abstract
Immunohistochemistry (IHC) is crucial for the clinical categorisation of breast cancer cases. Deep generative models may offer a cost-effective alternative by virtually generating IHC images from hematoxylin and eosin samples. This review explores the state-of-the-art in virtual staining for breast cancer biomarkers (HER2, PgR, ER and Ki-67) and benchmarks several models on public datasets. It serves as a resource for researchers and clinicians interested in applying or developing virtual staining techniques.
2025
Authors
Rocha, MA; Cardoso, JS; Montenegro, H;
Publication
2025 IEEE/CVF INTERNATIONAL CONFERENCE ON COMPUTER VISION WORKSHOPS, ICCVW
Abstract
Deep learning models have excelled in computer vision tasks in the past decade, but their lack of transparency raises ethical and legal concerns, especially in high-stakes areas such as surveillance and law enforcement. As such, regulations like the European Union's General Data Protection Regulation are now demanding interpretable Artificial Intelligence systems. This paper focuses on automatic face recognition, where existing systems lack interpretability and research into explainable alternatives is limited. To address this gap, we propose two interpretable facial verification models based on Siamese Networks that match and compare semantically-aligned local regions in the images. Experiments show these models rival and even outperform traditional baselines while offering clearer, more accountable explanations, advancing ethical and legally compliant facial recognition.
2025
Authors
Klöckner, P; Teixeira, J; Montezuma, D; Cardoso, JS; Horlings, HM; de Oliveira, SP;
Publication
CoRR
Abstract
2025
Authors
Pires, C; Nunes, S; Teixeira, LF;
Publication
Inf. Retr. Res. J.
Abstract
2025
Authors
Pires, C; Nunes, S; Teixeira, LF;
Publication
CoRR
Abstract
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