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Publications

Publications by CRIIS

2014

Satellite-based evapotranspiration of a super-intensive olive orchard: Application of METRIC algorithms

Authors
Pocas, I; Paco, TA; Cunha, M; Andrade, JA; Silvestre, J; Sousa, A; Santos, FL; Pereira, LS; Allen, RG;

Publication
BIOSYSTEMS ENGINEERING

Abstract
METRIC (TM) is a satellite-based surface energy balance model aimed at estimating and mapping crop evapotranspiration (ET). It has been applied to a large range of vegetation types, mostly annual crops. When applied to anisotropic woody canopies, such as olive orchards, extensions are required to algorithms for estimating the leaf area index (LAI), surface temperature, and momentum roughness length (Z(om)). The computation of the radiometric surface temperature needs to consider a three-source condition, thus differentiating the temperature of the canopy (T-c), of the shaded ground surface (T-shadow), and of the sunlit ground surface (T-sunlit). The estimation of the Z(om) for tall and incomplete cover is based upon the LAI and crop height using the Perrier equation. The LAI, Zorn, and temperature derived from METRIC after these adjustments were tested against field collected data with good results. The application of METRIC to a two year set of Landsat images to estimate ET of a super-intensive olive orchard in Southern Portugal produced good ET estimates that compared well with ground-based ET. The analysis of METRIC performance showed a quantitative improvement of ET estimates when applying the three-source condition for temperature estimation, as well as the Z(om) computation with the Perrier equation. Results show that METRIC can be used operationally to estimate and mapping ET of super-intensive olive orchards aiming at improving irrigation water use and management.

2014

Evapotranspiration and crop coefficients for a super intensive olive orchard. An application of SIMDualKc and METRIC models using ground and satellite observations

Authors
Paco, TA; Pocas, I; Cunha, M; Silvestre, JC; Santos, FL; Paredes, P; Pereira, LS;

Publication
JOURNAL OF HYDROLOGY

Abstract
The estimation of crop evapotranspiration (ETc) from the reference evapotranspiration (ETo) and a standard crop coefficient (K-c) in olive orchards requires that the latter be adjusted to planting density and height. The use of the dual K-c approach may be the best solution because the basal crop coefficient K-cb represents plant transpiration and the evaporation coefficient reproduces the soil coverage conditions and the frequency of wettings. To support related computations for a super intensive olive orchard, the model SIMDualKc was adopted because it uses the dual K-c approach. Alternatively, to consider the physical characteristics of the vegetation, the satellite-based surface energy balance model METRIC (TM) - Mapping EvapoTranspiration at high Resolution using Internalized Calibration - was used to estimate ETc and to derive crop coefficients. Both approaches were compared in this study. SIMDualKc model was calibrated and validated using sap-flow measurements of the transpiration for 2011 and 2012. In addition, eddy covariance estimation of ETc was also used. In the current study, METRIC (TM), was applied to Landsat images from 2011 to 2012. Adaptations for incomplete cover woody crops were required to parameterize METRIC. It was observed that ETc obtained from both approaches was similar and that crop coefficients derived from both models showed similar patterns throughout the year. Although the two models use distinct approaches, their results are comparable and they are complementary in spatial and temporal scales.

2014

A Time-Frequency Analysis on the Impact of Climate Variability on Semi-Natural Mountain Meadows

Authors
Cunha, M; Richter, C;

Publication
IEEE TRANSACTIONS ON GEOSCIENCE AND REMOTE SENSING

Abstract
This paper analyzes the impact of climate dynamics on vegetation growth for a rural mountainous region in northeastern Portugal. As a measure of vegetation growth, we use the normalized difference vegetation index (NDVI), which is based on the ten-day synthesis data set (S10) from Satellite Pour l'Observation de la Terre (SPOT-VEGETATION) imagery from 1998 to 2011. We test whether the dynamic growth pattern of the NDVI has changed due to climate variability, and we test the relationship of NDVI with temperature and available soil water (ASW). In order to do so, we use a time-frequency approach based on Kalman filter regressions in the time domain. The advantage of our approach is that it can be used even in the case where the sample size is relatively small. By estimating the important relationships in the time domain first and transferring them into the frequency domain, we are still able to derive a complete spectrum over all frequencies. In our example, we find a change of the cyclical pattern for the spring season and different changes if we take into account all seasons. In other words, we can distinguish between deterministic changes of the vegetation cycles and stochastic changes that only occur randomly. Deterministic changes imply that the data-generating process has changed (such as climate), whereas stochastic changes imply only temporary changes. We find that individual seasons undergo cyclical changes that are different from other seasons. Moreover, our analysis shows that temperature and ASW are the main drivers of vegetation growth. We can also recognize a shift of the relative importance away from temperature to soil water.

2014

An inelastic neutron scattering study of dietary phenolic acids

Authors
Marques, MPM; Batista de Carvalho, LAEB; Valero, R; Machado, NFL; Parker, SF;

Publication
PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Abstract
The conformational preferences and hydrogen-bonding motifs of several potential chemopreventive hydroxycinnamic derivatives were determined by inelastic neutron scattering spectroscopy. The aim is to understand their recognized beneficial activity and establish reliable structure-activity relationships for these types of dietary phytochemicals. A series of phenolic acids with different hydroxyl/methoxyl ring substitution patterns were studied: trans-cinnamic, p-coumaric, m-coumaric, trans-caffeic and ferulic acids. Their INS spectra were completely assigned by theoretical calculations performed at the Density Functional Theory level, for the isolated molecule, dimeric centrosymmetric species and the solid (using plane-wave expansion approaches). Access to the low energy vibrational region of the spectra enabled the identification of particular modes associated with intermolecular hydrogen-bonding interactions, which are the determinants of the main conformational preferences and antioxidant capacity of these systems.

2014

A physics simulation tool for the container loading problem

Authors
Ramos, AG; Jacob, J; Justo, J; Oliveira, JF; Rodrigues, R; Gomes, AM;

Publication
26th European Modeling and Simulation Symposium, EMSS 2014

Abstract
In the Container Loading Problem literature, the cargo dynamic stability constraint has been evaluated by the percentage of boxes with insufficient lateral support. This metric has been used as a proxy for the real-world dynamic stability constraint and has conditioned the algorithms developed for this problem. It has the advantage of not being expensive from a computation perspective. However, guaranteeing that at least three sides of a box are in contact with another box or with the container wall does not necessarily ensure stability during transportation. In this paper we propose a physics simulation tool based on a physics engine that will be used in the evaluation of the dynamic stability constraint. We compare the results of our physics simulation tool with the state-of-the-art simulation engineering software Abaqus Unified FEA, and conclude that our tool is a promising alternative.

2014

Distinctive EPR signals provide an understanding of the affinity of bis-(3-hydroxy-4-pyridinonato) copper(II) complexes for hydrophobic environments

Authors
Rangel, M; Leite, A; Silva, AMN; Moniz, T; Nunes, A; Amorim, MJ; Queiros, C; Cunha Silva, L; Gameiro, P; Burgess, J;

Publication
DALTON TRANSACTIONS

Abstract
In this work we report the synthesis and characterization of a set of 3-hydroxy-4-pyridinone copper(II) complexes with variable lipophilicity. EPR spectroscopy was used to characterize the structure of copper(II) complexes in solution, and as a tool to gain insight into solvent interactions. EPR spectra of solutions of the [CuL2] complexes recorded in different solvents reveal the presence of two copper species whose ratio depends on the nature of the solvent. Investigation of EPR spectra in the pure solvents methanol, dimethylsulfoxide, dichloromethane and their 50% (v/v) mixtures with toluene allowed the characterization of two types of copper signals (g(zz) = 2.30 and g(zz) = 2.26) whose spin-Hamiltonian parameters are consistent with solvated and non-solvated square-planar copper(II) complexes. Regarding the potential biological application of ligands and complexes and to get insight into the partition properties in water-membrane interfaces, EPR spectra were also obtained in water-saturated octanol, an aqueous solution buffered at pH = 7.4 and liposome suspensions, for three compounds representative of different hydrolipophilic balances. Analysis of the EPR spectra obtained in liposomes allowed establishment of the location of the complexes in the water and lipid phases. In view of the results of this work we put forward the use of EPR spectroscopy to assess the affinity of copper(II) complexes for a hydrophobic environment and also to obtain indirect information about the lipophilicity of the ligands and similar EPR silent complexes.

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