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Publications

Publications by HumanISE

2015

Validation of percutaneous puncture trajectory during renal access using 4D ultrasound reconstruction

Authors
Rodrigues, PL; Rodrigues, NF; Fonseca, JC; Vilaca, JL;

Publication
MEDICAL IMAGING 2015: IMAGE-GUIDED PROCEDURES, ROBOTIC INTERVENTIONS, AND MODELING

Abstract
Background: An accurate percutaneous puncture is essential for disintegration and removal of renal stones. Although this procedure has proven to be safe, some organs surrounding the renal target might be accidentally perforated. This work describes a new intraoperative framework where tracked surgical tools are superimposed within 4D ultrasound imaging for security assessment of the percutaneous puncture trajectory (PPT). Methods: A PPT is first generated from the skin puncture site towards an anatomical target, using the information retrieved by electromagnetic motion tracking sensors coupled to surgical tools. Then, 2D ultrasound images acquired with a tracked probe are used to reconstruct a 4D ultrasound around the PPT under GPU processing. Volume hole-filling was performed in different processing time intervals by a tri-linear interpolation method. At spaced time intervals, the volume of the anatomical structures was segmented to ascertain if any vital structure is in between PPT and might compromise the surgical success. To enhance the volume visualization of the reconstructed structures, different render transfer functions were used. Results: Real-time US volume reconstruction and rendering with more than 25 frames/s was only possible when rendering only three orthogonal slice views. When using the whole reconstructed volume one achieved 8-15 frames/s. 3 frames/s were reached when one introduce the segmentation and detection if some structure intersected the PPT. Conclusions: The proposed framework creates a virtual and intuitive platform that can be used to identify and validate a PPT to safely and accurately perform the puncture in percutaneous nephrolithotomy.

2015

Voxel-based registration of simulated and real patient CBCT data for accurate dental implant pose estimation

Authors
Moreira, AHJ; Queiros, S; Morais, P; Rodrigues, NF; Correia, AR; Fernandes, V; Pinho, ACM; Fonseca, JC; Vilaca, JL;

Publication
MEDICAL IMAGING 2015: COMPUTER-AIDED DIAGNOSIS

Abstract
The success of dental implant-supported prosthesis is directly linked to the accuracy obtained during implant's pose estimation (position and orientation). Although traditional impression techniques and recent digital acquisition methods are acceptably accurate, a simultaneously fast, accurate and operator-independent methodology is still lacking. Hereto, an image-based framework is proposed to estimate the patient-specific implant's pose using cone-beam computed tomography (CBCT) and prior knowledge of implanted model. The pose estimation is accomplished in a three-step approach: (1) a region-of-interest is extracted from the CBCT data using 2 operator-defined points at the implant's main axis; (2) a simulated CBCT volume of the known implanted model is generated through Feldkamp-Davis-Kress reconstruction and coarsely aligned to the defined axis; and (3) a voxel-based rigid registration is performed to optimally align both patient and simulated CBCT data, extracting the implant's pose from the optimal transformation. Three experiments were performed to evaluate the framework: (1) an in silico study using 48 implants distributed through 12 tridimensional synthetic mandibular models; (2) an in vitro study using an artificial mandible with 2 dental implants acquired with an i-CAT system; and (3) two clinical case studies. The results shown positional errors of 67+/-34 mu m and 108 mu m, and angular misfits of 0.15+/-0.08 degrees and 1.4 degrees, for experiment 1 and 2, respectively. Moreover, in experiment 3, visual assessment of clinical data results shown a coherent alignment of the reference implant. Overall, a novel image-based framework for implants' pose estimation from CBCT data was proposed, showing accurate results in agreement with dental prosthesis modelling requirements.

2015

A-scan ultrasound system for real-time puncture safety assessment during percutaneous nephrolithotomy

Authors
Rodrigues, PL; Rodrigues, NF; Fonseca, JC; von Kruger, MA; Pereira, WCA; Vilaca, JL;

Publication
MEDICAL IMAGING 2015: ULTRASONIC IMAGING AND TOMOGRAPHY

Abstract
Background: Kidney stone is a major universal health problem, affecting 10% of the population worldwide. Percutaneous nephrolithotomy is a first-line and established procedure for disintegration and removal of renal stones. Its surgical success depends on the precise needle puncture of renal calyces, which remains the most challenging task for surgeons. This work describes and tests a new ultrasound based system to alert the surgeon when undesirable anatomical structures are in between the puncture path defined through a tracked needle. Methods: Two circular ultrasound transducers were built with a single 3.3-MHz piezoelectric ceramic PZT SN8, 25.4 mm of radius and resin-epoxy matching and backing layers. One matching layer was designed with a concave curvature to work as an acoustic lens with long focusing. The A-scan signals were filtered and processed to automatically detect reflected echoes. Results: The transducers were mapped in water tank and tested in a study involving 45 phantoms. Each phantom mimics different needle insertion trajectories with a percutaneous path length between 80 and 150 mm. Results showed that the beam cross-sectional area oscillates around the ceramics radius and it was possible to automatically detect echo signals in phantoms with length higher than 80 mm. Conclusions: This new solution may alert the surgeon about anatomical tissues changes during needle insertion, which may decrease the need of X-Ray radiation exposure and ultrasound image evaluation during percutaneous puncture.

2015

Computer-aided recognition of dental implants in X-ray images

Authors
Morais, P; Queiros, S; Moreira, AHJ; Ferreira, A; Ferreira, E; Duque, D; Rodrigues, NF; Vilaca, JL;

Publication
MEDICAL IMAGING 2015: COMPUTER-AIDED DIAGNOSIS

Abstract
Dental implant recognition in patients without available records is a time-consuming and not straightforward task. The traditional method is a complete user-dependent process, where the expert compares a 2D X-ray image of the dental implant with a generic database. Due to the high number of implants available and the similarity between them, automatic/semi-automatic frameworks to aide implant model detection are essential. In this study, a novel computer-aided framework for dental implant recognition is suggested. The proposed method relies on image processing concepts, namely: (i) a segmentation strategy for semi-automatic implant delineation; and (ii) a machine learning approach for implant model recognition. Although the segmentation technique is the main focus of the current study, preliminary details of the machine learning approach are also reported. Two different scenarios are used to validate the framework: (1) comparison of the semi-automatic contours against implant's manual contours of 125 X-ray images; and (2) classification of 11 known implants using a large reference database of 601 implants. Regarding experiment 1, 0.97+/-0.01, 2.24+/-0.85 pixels and 11.12+/-6 pixels of dice metric, mean absolute distance and Hausdorff distance were obtained, respectively. In experiment 2, 91% of the implants were successfully recognized while reducing the reference database to 5% of its original size. Overall, the segmentation technique achieved accurate implant contours. Although the preliminary classification results prove the concept of the current work, more features and an extended database should be used in a future work.

2015

Scheduling Single-Machine Problem Oriented by Just-In-Time Principles - A Case Study

Authors
Dantas, JD; Varela, LR; Madureira, AM;

Publication
PROCEEDINGS OF THE 2015 10TH IBERIAN CONFERENCE ON INFORMATION SYSTEMS AND TECHNOLOGIES (CISTI 2015)

Abstract
Developments in advanced autonomous production resources have increased the interest in the Single-Machine Scheduling Problem (SMSP). Until now, researchers used SMSP with little to no practical application in industry, but with the introduction of multi-purpose machines, able of executing an entire task, such as 3D Printers, replacing extensive production chains, single-machine problems are becoming a central point of interest in real-world scheduling. In this paper we study how simple, easy to implement, Just-in-Time (JIT) based, constructive heuristics, can be used to optimize customer and enterprise oriented performance measures. Customer oriented performance measures are mainly related to the accomplishment of due dates while enterprise-oriented ones typically consider other time-oriented measures.

2015

Q-Learning Based Hyper-Heuristic For Scheduling System Self-Parameterization

Authors
Falcao, D; Madureira, A; Pereira, I;

Publication
PROCEEDINGS OF THE 2015 10TH IBERIAN CONFERENCE ON INFORMATION SYSTEMS AND TECHNOLOGIES (CISTI 2015)

Abstract
Optimization in current decision support systems has a highly interdisciplinary nature related with the need to integrate different techniques and paradigms for solving real-world complex problems. Computing optimal solutions in many of these problems are unmanageable. Heuristic search methods are known to obtain good results in an acceptable time interval. However, parameters need to be adjusted to allow good results. In this sense, learning strategies can enhance the performance of a system, providing it with the ability to learn, for instance, the most suitable optimization technique for solving a particular class of problems, or the most suitable parameterization of a given algorithm on a given scenario. Hyper-heuristics arise in this context as efficient methodologies for selecting or generating (meta) heuristics to solve NP-hard optimization problems. This paper presents the specification of a hyper-heuristic for selecting techniques inspired in nature, for solving the problem of scheduling in manufacturing systems, based on previous experience. The proposed hyper-heuristic module uses a reinforcement learning algorithm, which enables the system with the ability to autonomously select the meta-heuristic to use in optimization process as well as the respective parameters. A computational study was carried out to evaluate the influence of the hyper-heuristics on the performance of a scheduling system. The obtained results allow to conclude about the effectiveness of the proposed approach.

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