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Publicações

Publicações por Hélder Filipe Oliveira

2010

Improving the BCCT.core model with lateral information

Autores
Oliveira, HP; Magalhaes, A; Cardoso, MJ; Cardoso, JS;

Publicação
Proceedings of the IEEE/EMBS Region 8 International Conference on Information Technology Applications in Biomedicine, ITAB

Abstract
Breast Cancer Conservative Treatment (BCCT) is considered the gold standard of breast cancer treatment. However, the aesthetic outcome is diverse and very difficult to evaluate in a consistent way partly due to the weak reproducibility of the subjective methods in use. T his motivated the research on the objective methods. BCCT.core is a very recent software that objectively and automatically evaluates the aesthetic outcome of BCCT. However, as in other approaches, the system only uses frontal patient information, disregarding volumetric perception on lateral measurements. In the current work we investigate the improvement of the BCCT.core model by introducing lateral information extracted from patients images. We compare the performance of the model currently used on BCCT.core with the model developed in this study. Experimental results suggest that with lateral measurements the model presents better performance, however improvements are not significant. We can conclude that is essential to use robust models on the BCCT, and the input of 3D models will probably help to obtain better results. © 2010 IEEE.

2012

Proactive engineering

Autores
Duarte, C; Oliveira, HP; Magalhães, F; Tavares, VG; Campilho, AC; de Oliveira, PG;

Publicação
Proceedings of the IEEE Global Engineering Education Conference, EDUCON 2012, Marrakech, Morocco, April 17-20, 2012

Abstract
This paper presents two initiatives run by groups of engineering students at the University of Porto: the Microelectronics Students' Group and BioStar. These groups are student-led initiatives that promote different scientific fields through self-guided projects. Both experiences have proven to be very successful in increasing the undergraduate student's interest in science and technology. This work reports the activities, organization and main methodologies employed by these groups, which can be seen as successful approaches to enhance the technical curriculum of students. © 2012 IEEE.

2023

Automated Detection and Identification of Olive Fruit Fly Using YOLOv7 Algorithm

Autores
Victoriano, M; Oliveira, L; Oliveira, HP;

Publicação
IbPRIA

Abstract
The impact of climate change on global temperature and precipitation patterns can lead to an increase in extreme environmental events. These events can create favourable conditions for the spread of plant pests and diseases, leading to significant production losses in agriculture. To mitigate these losses, early detection of pests is crucial in order to implement effective and safe control management strategies, to protect the crops, public health and the environment. Our work focuses on the development of a computer vision framework to detect and classify the olive fruit fly, also known as Bactrocera oleae, from images, which is a serious concern to the EU’s olive tree industry. The images of the olive fruit fly were obtained from traps placed throughout olive orchards located in Greece. The approach entails augmenting the dataset and fine-tuning the YOLOv7 model to improve the model performance, in identifying and classifying olive fruit flies. A Portuguese dataset was also used to further perform detection. To assess the model, a set of metrics were calculated, and the experimental results indicated that the model can precisely identify the positive class, which is the olive fruit fly.

2023

Special Issue on Novel Applications of Artificial Intelligence in Medicine and Health

Autores
Pereira, T; Cunha, A; Oliveira, HP;

Publicação
APPLIED SCIENCES-BASEL

Abstract
Artificial Intelligence (AI) is one of the big hopes for the future of a positive revolution in the use of medical data to improve clinical routine and personalized medicine [...]

2023

Learning Models for Bone Marrow Edema Detection in Magnetic Resonance Imaging

Autores
Ribeiro, G; Pereira, T; Silva, F; Sousa, J; Carvalho, DC; Dias, SC; Oliveira, HP;

Publicação
APPLIED SCIENCES-BASEL

Abstract
Bone marrow edema (BME) is the term given to the abnormal fluid signal seen within the bone marrow on magnetic resonance imaging (MRI). It usually indicates the presence of underlying pathology and is associated with a myriad of conditions/causes. However, it can be misleading, as in some cases, it may be associated with normal changes in the bone, especially during the growth period of childhood, and objective methods for assessment are lacking. In this work, learning models for BME detection were developed. Transfer learning was used to overcome the size limitations of the dataset, and two different regions of interest (ROI) were defined and compared to evaluate their impact on the performance of the model: bone segmention and intensity mask. The best model was obtained for the high intensity masking technique, which achieved a balanced accuracy of 0.792 +/- 0.034. This study represents a comparison of different models and data regularization techniques for BME detection and showed promising results, even in the most difficult range of ages: children and adolescents. The application of machine learning methods will help to decrease the dependence on the clinicians, providing an initial stratification of the patients based on the probability of edema presence and supporting their decisions on the diagnosis.

2023

Lung CT image synthesis using GANs

Autores
Mendes, J; Pereira, T; Silva, F; Frade, J; Morgado, J; Freitas, C; Negrao, E; de Lima, BF; da Silva, MC; Madureira, AJ; Ramos, I; Costa, JL; Hespanhol, V; Cunha, A; Oliveira, HP;

Publicação
EXPERT SYSTEMS WITH APPLICATIONS

Abstract
Biomedical engineering has been targeted as a potential research candidate for machine learning applications, with the purpose of detecting or diagnosing pathologies. However, acquiring relevant, high-quality, and heterogeneous medical datasets is challenging due to privacy and security issues and the effort required to annotate the data. Generative models have recently gained a growing interest in the computer vision field due to their ability to increase dataset size by generating new high-quality samples from the initial set, which can be used as data augmentation of a training dataset. This study aimed to synthesize artificial lung images from corresponding positional and semantic annotations using two generative adversarial networks and databases of real computed tomography scans: the Pix2Pix approach that generates lung images from the lung segmentation maps; and the conditional generative adversarial network (cCGAN) approach that was implemented with additional semantic labels in the generation process. To evaluate the quality of the generated images, two quantitative measures were used: the domain-specific Frechet Inception Distance and Structural Similarity Index. Additionally, an expert assessment was performed to measure the capability to distinguish between real and generated images. The assessment performed shows the high quality of synthesized images, which was confirmed by the expert evaluation. This work represents an innovative application of GAN approaches for medical application taking into consideration the pathological findings in the CT images and the clinical evaluation to assess the realism of these features in the generated images.

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