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Publicações

Publicações por Daniela Santos

2022

Enabling Early Obstructive Sleep Apnea Diagnosis With Machine Learning: Systematic Review

Autores
Ferreira Santos, D; Amorim, P; Martins, TS; Monteiro Soares, M; Rodrigues, PP;

Publicação
JOURNAL OF MEDICAL INTERNET RESEARCH

Abstract
Background: American Academy of Sleep Medicine guidelines suggest that clinical prediction algorithms can be used to screen patients with obstructive sleep apnea (OSA) without replacing polysomnography, the gold standard.Objective: We aimed to identify, gather, and analyze existing machine learning approaches that are being used for disease screening in adult patients with suspected OSA. Methods: We searched the MEDLINE, Scopus, and ISI Web of Knowledge databases to evaluate the validity of different machine learning techniques, with polysomnography as the gold standard outcome measure and used the Prediction Model Risk of Bias Assessment Tool (Kleijnen Systematic Reviews Ltd) to assess risk of bias and applicability of each included study. Results: Our search retrieved 5479 articles, of which 63 (1.15%) articles were included. We found 23 studies performing diagnostic model development alone, 26 with added internal validation, and 14 applying the clinical prediction algorithm to an independent sample (although not all reporting the most common discrimination metrics, sensitivity or specificity). Logistic regression was applied in 35 studies, linear regression in 16, support vector machine in 9, neural networks in 8, decision trees in 6, and Bayesian networks in 4. Random forest, discriminant analysis, classification and regression tree, and nomogram were each performed in 2 studies, whereas Pearson correlation, adaptive neuro-fuzzy inference system, artificial immune recognition system, genetic algorithm, supersparse linear integer models, and k-nearest neighbors algorithm were each performed in 1 study. The best area under the receiver operating curve was 0.98 (0.96-0.99) for age, waist circumference, Epworth Somnolence Scale score, and oxygen saturation as predictors in a logistic regression. Conclusions: Although high values were obtained, they still lacked external validation results in large cohorts and a standard OSA criteria definition. Trial Registration: PROSPERO CRD42021221339; https://www.crd.york.ac.uk/prospero/display_record.php?RecordID=221339(J Med Internet Res 2022;24(9):e39452) doi: 10.2196/39452

2022

Association between co-morbidities and prescribed drugs in obstructive sleep apnea suspected patients: an inductive rule learning approach (Preprint)

Autores
Ferreira-Santos, D; Pereira Rodrigues, P;

Publicação
Journal of Medical Internet Research

Abstract

2023

The Association Between Comorbidities and Prescribed Drugs in Patients With Suspected Obstructive Sleep Apnea: Inductive Rule Learning Approach

Autores
Ferreira-Santos, D; Rodrigues, PP;

Publicação
JOURNAL OF MEDICAL INTERNET RESEARCH

Abstract
[No abstract available]

2022

Helping early obstructive sleep apnea diagnosis with machine learning: A systematic review (Preprint)

Autores
Ferreira-Santos, D; Amorim, P; Silva Martins, T; Monteiro-Soares, M; Pereira Rodrigues, P;

Publicação

Abstract
BACKGROUND

American Academy of Sleep Medicine guidelines suggests that clinical prediction algorithms can be used to screen obstructive sleep apnea (OSA) patients without replacing polysomnography (PSG) – the gold standard.

OBJECTIVE

We aimed to identify, gather, and analyze existing machine learning approaches that are being used for disease screening in adult patients suspected of OSA.

METHODS

We searched MEDLINE, Scopus and ISI Web of Knowledge databases for evaluating the validity of different machine learning techniques, with PSG as the gold standard outcome measures. This systematic review was registered in PROSPERO under reference CRD42021221339.

RESULTS

Our search retrieved 5479 articles, of which 63 articles were included. We found 23 studies performing diagnostic models’ development alone, 26 with added internal validation, and 14 applying the clinical prediction algorithm to an independent sample (although not all reporting the most common discrimination metrics - sensitivity and/or specificity). Logistic regression was applied in 35 studies, linear regression in 16, support vector machine in 9, neural networks in 8, decision trees in 6, and Bayesian networks in 4. Random forest, discriminant analysis, classification and regression tree, and nomogram were each performed in 2 studies, while Pearson correlation, adaptative neuro-fuzzy inference system, artificial immune recognition system, genetic algorithm, supersparse linear integer models, and k-nearest neighbors’ algorithm each in 1 study. The best AUC was .98 [.96-.99] for age, waist circumference, Epworth somnolence, and oxygen saturation as predictors in a logistic regression.

CONCLUSIONS

Although high values were obtained, they still lack external validation results in large cohorts and a standard OSA criteria definition.

2023

The Role of Novel Digital Clinical Tools in the Screening or Diagnosis of Obstructive Sleep Apnea: Systematic Review

Autores
Duarte, M; Pereira Rodrigues, P; Ferreira Santos, D;

Publicação
JOURNAL OF MEDICAL INTERNET RESEARCH

Abstract
Background: Digital clinical tools are a new technology that can be used in the screening or diagnosis of obstructive sleep apnea (OSA), notwithstanding the crucial role of polysomnography, the gold standard.Objective: This study aimed to identify, gather, and analyze the most accurate digital tools and smartphone-based health platforms used for OSA screening or diagnosis in the adult population. Methods: We performed a comprehensive literature search of PubMed, Scopus, and Web of Science databases for studies evaluating the validity of digital tools in OSA screening or diagnosis until November 2022. The risk of bias was assessed using the Joanna Briggs Institute critical appraisal tool for diagnostic test accuracy studies. The sensitivity, specificity, and area under the curve (AUC) were used as discrimination measures.Results: We retrieved 1714 articles, 41 (2.39%) of which were included in the study. From these 41 articles, we found 7 (17%) smartphone-based tools, 10 (24%) wearables, 11 (27%) bed or mattress sensors, 5 (12%) nasal airflow devices, and 8 (20%) other sensors that did not fit the previous categories. Only 8 (20%) of the 41 studies performed external validation of the developed tool. Of these, the highest reported values for AUC, sensitivity, and specificity were 0.99, 96%, and 92%, respectively, for a clinical cutoff of apnea-hypopnea index (AHI)& GE;30. These values correspond to a noncontact audio recorder that records sleep sounds, which are then analyzed by a deep learning technique that automatically detects sleep apnea events, calculates the AHI, and identifies OSA. Looking at the studies that only internally validated their models, the work that reported the highest accuracy measures showed AUC, sensitivity, and specificity values of 1.00, 100%, and 96%, respectively, for a clinical cutoff AHI & GE;30. It uses the Sonomat-a foam mattress that, aside from recording breath sounds, has pressure sensors that generate voltage when deformed, thus detecting respiratory movements, and uses it to classify OSA events.Conclusions: These clinical tools presented promising results with high discrimination measures (best results reached AUC>0.99). However, there is still a need for quality studies comparing the developed tools with the gold standard and validating them in external populations and other environments before they can be used in clinical settings.

2023

The role of novel clinical digital tools in the screening or diagnosis of Obstructive Sleep Apnea – A systematic review (Preprint)

Autores
Duarte, M; Pereira-Rodrigues, P; Ferreira-Santos, D;

Publicação

Abstract
BACKGROUND

Clinical digital tools are an up-and-coming new technology that can be used in the screening or diagnosis of obstructive sleep apnea (OSA) patients, notwithstanding the crucial role of polysomnography (PSG) – the gold standard.

OBJECTIVE

The aim of our study was to identify, gather, and analyze existing digital tools and smartphone-based health platforms that are being used for this disease’s screening or diagnosis in the adult population.

METHODS

We performed a comprehensive literature search in MEDLINE, Scopus, and Web of Science databases for studies evaluating the validity of digital tools in OSA screening or diagnosis until November 2022. The risk of bias was assessed using JBI Critical Appraisal Tool for Diagnostic Test Accuracy Studies. Sensitivity, specificity, and area under the receiver-operating curve (AUC) were used as discrimination measures.

RESULTS

We retrieved 1714 articles, 41 of which were included. We found 7 smartphone-based tools, 10 wearables, 11 bed/mattress sensors, 5 nasal airflow devices, and 8 other sensors that did not fit the previous categories. Only 8 (20%) studies performed external validation of their developed tool. Of those, the highest reported values for AUC, sensitivity, and specificity were 0.99, 96%, and 92%, respectively, for a clinical cutoff of apnea-hypopnea index (AHI) = 30 and correspond to a non-contact audio recorder that records sleep sounds, which are then analyzed by a deep learning technique that automatically detects sleep apnea events, calculates the AHI, and identifies OSA. Looking at the studies that only internally validated their models, the work that reported the highest accuracy measures showed AUC, sensitivity, and specificity values of 1.00, 100%, and 96%, respectively, for a clinical cutoff AHI = 30. It uses the Sonomat – a foam mattress that, aside from recording breath sounds, has pressure sensors that generate voltage when deformed, thus detecting respiratory movements, and using it to classify OSA events.

CONCLUSIONS

These clinical tools presented promising results, showing high discrimination measures (best results reaching AUC > 0.99). However, there is still a need for quality studies, comparing the developed tools with the gold standard and validating them in external populations and other environments before they can be used in a clinical setting.

CLINICALTRIAL

This systematic review was registered in PROSPERO under reference CRD42023387748.

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